RNA id: TU25015



Basic Information


Item Value
RNA id TU25015
length 205
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G20137
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54615246 ~ 54615450 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cgcttactcaagacgcatcttttccgacagcacttgtaatattagtccttttatccccgttagatagcacttcacagttttattatgcttcttgcgttcttgattgttttcctccttgctccctttcccgtagcccttgactgtgaccctacatcttgatagcacttagctttcaccgtccaggatgtaggacctcacttactgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU25009 lncRNA downstream 7632 54607363 ~ 54607614 (-) True G20131
TU25000 lncRNA downstream 35528 54579265 ~ 54579718 (-) True G20122
TU24982 lncRNA downstream 86049 54527784 ~ 54529197 (-) False AMCG00017358
TU24996 lncRNA downstream 104758 54510236 ~ 54510488 (-) True G20118
TU24994 lncRNA downstream 117208 54494935 ~ 54498038 (-) True G20116
AMCG00017368 mRNA downstream 19889 54589059 ~ 54595357 (-) True AMCG00017368
AMCG00017365 mRNA downstream 27721 54580070 ~ 54587525 (-) True AMCG00017365
AMCG00017359 mRNA downstream 37153 54572425 ~ 54578093 (-) True AMCG00017359
AMCG00017362 mRNA downstream 44688 54570271 ~ 54570558 (-) True AMCG00017362
AMCG00017360 mRNA downstream 56651 54555357 ~ 54558595 (-) True AMCG00017360
AMCG00017366 mRNA upstream 22973 54638423 ~ 54647934 (-) True AMCG00017366
AMCG00017367 mRNA upstream 39385 54654835 ~ 54661911 (-) True AMCG00017367
AMCG00017379 mRNA upstream 78434 54693884 ~ 54701627 (-) True AMCG00017379
AMCG00017380 mRNA upstream 88497 54703947 ~ 54704219 (-) True AMCG00017380
AMCG00017375 mRNA upstream 110155 54725605 ~ 54729120 (-) True AMCG00017375
TU24923 other downstream 247230 54366784 ~ 54368016 (-) True G20064
TU24816 other downstream 461152 54117264 ~ 54154094 (-) True G19998
TU24820 other downstream 470030 54142138 ~ 54145216 (-) False AMCG00017343
TU24763 other downstream 581085 54032639 ~ 54034161 (-) True G19950
TU24740 other downstream 657906 53953294 ~ 53957340 (-) False AMCG00017334
TU25029 other upstream 30387 54645837 ~ 54651864 (-) False AMCG00017366
TU25083 other upstream 85120 54700570 ~ 54704280 (-) False G20193
TU25084 other upstream 85120 54700570 ~ 54723791 (-) True G20193
TU25086 other upstream 85120 54700570 ~ 54723791 (-) False G20193
TU25136 other upstream 221647 54837097 ~ 54838491 (-) True G20237

Expression Profile