RNA id: TU25035



Basic Information


Item Value
RNA id TU25035
length 422
RNA type TUCP
GC content 0.52
exon number 6
gene id G20156
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54663311 ~ 54664526 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgtgtgatcagtgttgtgtgtgttgcaggtggAGGCTGTGATTAAGAAGCACAgagagcagctgctgcaggagagaTATCACTTCAATATGGGGCTGCTAATGGGGGAGGCACGGAGCACGCTGAAATGGGCTGATGGGAAGATCATCAAAAACGAGGTGGACATGCAGGTCCTCCACCTCTTGGGGCCAAAGACTGAAGCCGACCTGGAGAAGAAAGCCAAGacACCTCGAGCTAAAGCAccagagaacaacaacaacaagaggaagacaaaggaggaggaggagactcTGAACgGGGAGGTGAAACTGGAGGGAAAGTCCCTGATGGAGCAGCTCAGAGGAGAGGCCCTCAAATTCCACAAACCAGGTGAGAACTATAAGACAGAGGGTTACGTGGTGACGCCCCACACCATGACNNNNN

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU25014 lncRNA upstream 47863 54615241 ~ 54615448 (+) True G20136
TU24949 lncRNA upstream 80912 54579081 ~ 54582399 (+) False G20085
TU24951 lncRNA upstream 107986 54552140 ~ 54555325 (+) True G20086
TU24878 lncRNA upstream 219308 54442538 ~ 54444003 (+) False AMCG00017357
TU24837 lncRNA upstream 270720 54316979 ~ 54392591 (+) True G20013
TU25057 lncRNA downstream 68494 54733020 ~ 54737869 (+) True G20177
TU25112 lncRNA downstream 130970 54795496 ~ 54797145 (+) True G20218
TU25126 lncRNA downstream 178450 54842976 ~ 54844239 (+) False AMCG00017369
AMCG00017363 mRNA upstream 30739 54630638 ~ 54632572 (+) True AMCG00017363
AMCG00017361 mRNA upstream 168052 54493577 ~ 54495259 (+) True AMCG00017361
AMCG00017355 mRNA upstream 194176 54461909 ~ 54469135 (+) True AMCG00017355
AMCG00017357 mRNA upstream 211257 54423553 ~ 54452054 (+) True AMCG00017357
AMCG00017356 mRNA upstream 240679 54389332 ~ 54422632 (+) True AMCG00017356
AMCG00017364 mRNA downstream 2354 54666880 ~ 54673342 (+) True AMCG00017364
AMCG00017383 mRNA downstream 24397 54688923 ~ 54690827 (+) True AMCG00017383
AMCG00017381 mRNA downstream 143940 54808466 ~ 54808810 (+) False AMCG00017381
AMCG00017370 mRNA downstream 156610 54821136 ~ 54826385 (+) True AMCG00017370
AMCG00017382 mRNA downstream 172211 54836737 ~ 54837616 (+) True AMCG00017382
TU24950 other upstream 80912 54573474 ~ 54582399 (+) True G20085
TU24970 other upstream 134107 54527752 ~ 54529204 (+) True G20099
TU24839 other upstream 345098 54307795 ~ 54318213 (+) False G20013
TU24774 other upstream 597124 54064358 ~ 54066187 (+) True G19961
TU24769 other upstream 608136 54054800 ~ 54055175 (+) True G19956
TU25114 other downstream 143960 54808486 ~ 54809106 (+) True AMCG00017381

Expression Profile