RNA id: AMCG00017384


Basic Information

Item Value
RNA id AMCG00017384
length 1239
RNA type mRNA
GC content 0.55
exon number 12
gene id AMCG00017384
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 160054 ~ 351786 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atggccagtggaaatgggaGGAGCACGGTTACTAATATCCTGGCACAGCATCCGGCTACAGGAGCAATTGCATTGATGACTGAGGGCAGAGAGCTGATTCTGGAGGTTGAGCGCAATCATCAGCTGCTGGGCCAAGATTTCTCAGAGACCCATTATACTAAGGATGGGATACCAGTGACAATCAAGCCAAATTACACATTAAAGCAGGCAGGTACAATGTGTCGGGAGCCAGCAGGGGCCTGTGACCTGCCTGAGTACTGCACCGGAGCCTCCCCCTACTGCCCTTCCAATGTCTACTTACTCGATGGCTCTTCCTGCCTCTATGGGCATGCATACTGCTACAATGGCATGTGTCTCACCCATGAGCAGCAGTGTCTCCAGCTGTGGGGATACGGTGCCCGACCAGCTCCTGATGCCTGCTTTCAAGATGTGAATGCTGCTGGGAATGCCTATGGGAATTGTGGGAAGGATGGACAGGGGAATTATATGAAGTGCGAGAAAAGTGACGCAAAGTGTGGTAAGATCCAGTGCCAGAGTGCTGCCAAAAAGCCAAAGGGAACCAATGCTGTTCCCATTGACACCACCATCCGCTTCAATGGTGTGGAGGTGAAGTGTCGAGGGACCTTTGTCTACACCACCCAAGAGGGGGATGGTGACCTGCTAGACCCAGGGCTCGTTATGACAGGGACCAAATGTGATCGCCGCTGTCAGAATGCATCTTTTTCTGAGCTGGAAAGCTGCATCTCCCAGTGTCACAATCATGGGGTGTGCAACAGCAACAGAAACTGCCACTGTGCTGCTGGTTGGGCTCCTCCATACTGTGACAAGCCTGGCCTGGGGGGAAGTTTGGACAGCGGGCCTGTCCAGTATGACAGTCAGCGGGGTCTTGTGGTGGGTCTGCTTTTTGCCTTCCTGGTGGTCCTACCAGGAGTGCTTACAGTCTTCTACTGCTACAAGGTCAAGACTTCCCTCTACCACAAGTGGTATTCCCAGAAGGACAAGGGCTCCCTCCCTCACACCGGTAAGGAGGCCCTGCCCCTGCGACCACCTCCTGGCCCAACTGGCTCTCAACCTGTCAATATTGTGCGCCCCATGCGCCCTGCTTCCTCCCCCAATGCCCATCCCACCTCAGAAGCGTTGGGCCTCGATctgctgctgcaggagaggaGAGTCAACTACCTGCAGGGGTCCCGAGCCCATGCCCATGGCTGGTGCAGCAACTCCTGTGGACAACAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112090 lncRNA upstream 108847 385671 ~ 447085 (-) True G89870
TU112108 lncRNA upstream 186384 463208 ~ 463423 (-) True G89883
TU112110 lncRNA upstream 225343 502167 ~ 528797 (-) True G89885
TU112117 lncRNA upstream 356092 632916 ~ 633178 (-) True G89892
TU112118 lncRNA upstream 414746 691570 ~ 691851 (-) True G89893
AMCG00017387 mRNA upstream 83631 360455 ~ 470430 (-) True AMCG00017387
AMCG00017391 mRNA upstream 659057 935881 ~ 936676 (-) True AMCG00017391
AMCG00017393 mRNA upstream 998408 1275232 ~ 1289433 (-) True AMCG00017393
AMCG00017394 mRNA upstream 1161704 1438528 ~ 1447581 (-) True AMCG00017394
AMCG00017395 mRNA upstream 1278704 1555528 ~ 1561186 (-) True AMCG00017395
TU112008 other downstream 54169 105685 ~ 105885 (-) True G89804
TU112472 other upstream 2331865 2608689 ~ 2615524 (-) False AMCG00017418
TU112697 other upstream 4265951 4542775 ~ 4544760 (-) True G90400
TU112828 other upstream 4881560 5158384 ~ 5221021 (-) False G90501
TU112835 other upstream 4881560 5158384 ~ 5221021 (-) True G90501
TU112836 other upstream 4945649 5222473 ~ 5223047 (-) True G90502

Expression Profile