RNA id: AMCG00017386


Basic Information

Item Value
RNA id AMCG00017386
length 624
RNA type mRNA
GC content 0.61
exon number 6
gene id AMCG00017386
representative False

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 48007 ~ 98397 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCTCAGACCAAAAGACACATGTACAGCCGGGCCCTGAGCAGCGGCAGCAGGATGAGTTCAGAGGGGGGAGGCAAGCCGGTCAAGGTGGGCTCCCGGGTGGAGGTGATCGGCAAAGGCCACCGAGGCACTGTGGCTTACATCGGTGCTACTCTCTTTGCCACCGGCAAGTGGGTGGGAGTGATCCTGGATGATGCCAAGGGCAAGAACGACGGTACGGTGCAGGGCAAGCGGTACTTCACTTGTGAGGAGAACCACGGTATCTTTGTGCGCCAGTCTCAGATCCAGATGGTTGAAGATGGAGCAGACACAACTTCTCCGGAGACCCCAGAATCAACCGTATCCAAGGTCCCCAAACGAGAGCTGTTGGAAACTCCCAAATCAAGCAAGCTGACCACCACCCGGCGCACCAAGCCAACACGGCCCTCCAGCAATGCGGCTTCCAATGGCACACCTGGCCCCTCAGGCTCAGCCTCGGCCTCGGGGGGTGAGATGAGCAGCAGCGAGCCCAGCACACCTGCTCAGACACCCCTGGCAGCGCCCGTCATCCCCACGCCCAGCGGCTCCCTAACCTCTCCGGGTGCTCCTCCTGCACCCATTACCAGCAAGGTTAGCACAGCTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111984 lncRNA upstream 14655 42802 ~ 43065 (+) True G89784
TU112023 lncRNA downstream 76653 175050 ~ 176503 (+) True G89818
TU112024 lncRNA downstream 78849 177246 ~ 179935 (+) True G89819
TU112039 lncRNA downstream 128854 227251 ~ 228724 (+) True G89832
TU112047 lncRNA downstream 244218 342615 ~ 402466 (+) True G89837
TU112121 lncRNA downstream 647357 745754 ~ 745999 (+) True G89896
AMCG00017385 mRNA downstream 11278 109675 ~ 171747 (+) True AMCG00017385
AMCG00017388 mRNA downstream 111000 209397 ~ 210954 (+) False AMCG00017388
AMCG00017389 mRNA downstream 323112 421509 ~ 440294 (+) True AMCG00017389
AMCG00017390 mRNA downstream 756881 855278 ~ 887994 (+) True AMCG00017390
AMCG00017392 mRNA downstream 1167045 1265442 ~ 1267334 (+) True AMCG00017392
TU112033 other downstream 109189 207586 ~ 211936 (+) True AMCG00017388
TU112484 other downstream 2589023 2687420 ~ 2695453 (+) True AMCG00017422
TU112485 other downstream 2589023 2687420 ~ 2695453 (+) False AMCG00017422
TU112690 other downstream 4564262 4662659 ~ 4667830 (+) True AMCG00017446
TU113125 other downstream 6631341 6729738 ~ 7184790 (+) False AMCG00017486

Expression Profile