RNA id: AMCG00017420


Basic Information

Item Value
RNA id AMCG00017420
length 1644
RNA type mRNA
GC content 0.41
exon number 4
gene id AMCG00017420
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2709071 ~ 2712473 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GACTTCTGTGACGTAAGCGTGGTCAAGAGATTTCGGTTTATCCCAGCGTGGGGGTGTGGACCTGCTCTGACTTCGGAGGTggattatattgtattgtattgcatattGCATGGGTGTATTGCTGCAGTCACGTTATTTGTGAGGGATTGCGTCACCAGAATCGATTAGCAGGCTTTCCGCTTTCACATTTAAAGGCGCATAACTTCTGTTTGCGAAGTTGATGGCGCTGGTGTTTATGTTGCGGTAGTCCATTGATTGAGGAGCACTGCCAGTATCCTGTtgttgtttccccccccccctctcgtTATAGCGGTCAAACTTTTGCACACATAATGCGCTGCGCTTTTTCATCGTTGATGTTTTAGTTGTAATCTTTTTTTAGGCATTTTGCTCGAAGTGAAACATGCCCGGTGTCCGAGAGGCAGGGTTGCTGGGAGCTGCTTTTGCGGTTACCGGAGGATTTGCCTATGCCATCTGGAGTTACTTATCTCCGGGGCAGAAAGAGGAGAAGGCGAGCGCTGAAAATACCGGAGAAGTACCAGCAGTTACAGAGGTGAAATCTGCCAACAAACAGGTTCTTGTGCTAGGGCTGGATGGAGCTGGAAAGACCAGTGTGCTGCACTGTCTGGCCACTGGCACTGTGAAGAGGAGCGTGTCTCCCACAGAAGGCTTCAATGCTGTCTGCATTAATAAAGAAGACATGCAGATTGAGTTCTTAGAAATTGGCGGTAGTGAAAAGCTGAGGACGTATTGGAATATGTACCTCGGCAAGGCCCAGGTGTTGGTGTTTGTAGTGGACTCTGCTGACCCGGACCGCTTTCCTTTGGCAAAGACGCACCTTCATGGACTGATAAAGAATGACTCCTGCTTGCCATTAGTGGTTTTAGTCAATAAACAGGATTTGCAGGGTGCCTGCAGTATTACAGAGATGCATGATGCTTTGTCGTTGTCTGAAGTGGGGGATGAAAGAAAGCTCTTCATTATCAGCACACATGTGAAAAAGGATGACTTGCAGGTCCCATCTAGCGTACAGGATGCACGGGAGCTTATTACTCAGCTGGTGTCAGAAAGTAGATAAAAGTATTTGTATAACTTGCCCAATGTGAGAGAAATGtttaatgtagtttttgttttgtttttgtttttatgagtaTCCCACAGTATAAGTATCCTAAGTAACAGTTCAGAGTGTTTCTGATTCAGAAGATACAATATTTAAACTGGTTagttagctttttttttttttttttttggtttgttgtgcATCAGTTCTCCTGTTGGTTACTATCTATGAGTCTTTTTTtctaagttattatttttaatattcattgtttggtggttttggttttgtacttaaaaatgctttacattttcttcttaagatatatagtttattacaaacaaagcTAAAgggttgttggtttgttttgaagaatatatttgcataaaatatattttctatcaTTGATAGCTAATAATCACAACGACTACAACCAATGAAAAGCTTGGCTATGTGAGGTGTGAAAATCGGTAGATCTATAATTCACCTTATCTACTCATCTGCAATATTTTAAGCCAAGCTTAGTTGCTGCAGTTTTTCAATTGAAATTGCTGAacttctgtaaaaaaataaataaaagcttt

Function

GO: NA

KEGG:

id description
K07957 ARL9; ADP-ribosylation factor-like protein 9

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112419 lncRNA upstream 180270 2491907 ~ 2528801 (+) True G90149
TU112409 lncRNA upstream 204907 2461882 ~ 2504164 (+) True G90144
TU112325 lncRNA upstream 704465 2003038 ~ 2004606 (+) True G90070
TU112326 lncRNA upstream 704465 2004076 ~ 2004606 (+) False G90070
TU112288 lncRNA upstream 774287 1929142 ~ 1934784 (+) True G90042
TU112532 lncRNA downstream 524972 3237445 ~ 3237726 (+) True G90248
TU112571 lncRNA downstream 1185345 3897818 ~ 3898125 (+) True G90284
TU112621 lncRNA downstream 1599785 4312258 ~ 4312475 (+) True G90333
TU112625 lncRNA downstream 1617897 4330370 ~ 4330583 (+) True G90337
TU112626 lncRNA downstream 1672768 4385241 ~ 4390541 (+) True G90338
AMCG00017421 mRNA upstream 428 2696109 ~ 2708643 (+) True AMCG00017421
AMCG00017422 mRNA upstream 14701 2687501 ~ 2694370 (+) False AMCG00017422
AMCG00017424 mRNA upstream 25563 2674951 ~ 2683508 (+) True AMCG00017424
AMCG00017419 mRNA upstream 44518 2662686 ~ 2664553 (+) True AMCG00017419
AMCG00017416 mRNA upstream 59588 2646274 ~ 2649483 (+) True AMCG00017416
AMCG00017423 mRNA downstream 684 2713157 ~ 2726827 (+) True AMCG00017423
AMCG00017427 mRNA downstream 563190 3275663 ~ 3481722 (+) True AMCG00017427
AMCG00017428 mRNA downstream 854787 3567260 ~ 3568720 (+) True AMCG00017428
AMCG00017429 mRNA downstream 1476775 4189248 ~ 4199454 (+) True AMCG00017429
AMCG00017439 mRNA downstream 1670859 4383332 ~ 4384747 (+) True AMCG00017439
TU112484 other upstream 13618 2687420 ~ 2695453 (+) True AMCG00017422
TU112485 other upstream 13618 2687420 ~ 2695453 (+) False AMCG00017422
TU112033 other upstream 2497135 207586 ~ 211936 (+) True AMCG00017388
TU111992 other upstream 2610688 69898 ~ 98383 (+) False AMCG00017386
TU112690 other downstream 1950186 4662659 ~ 4667830 (+) True AMCG00017446
TU113125 other downstream 4017265 6729738 ~ 7184790 (+) False AMCG00017486
TU113143 other downstream 4017265 6729738 ~ 7184790 (+) False AMCG00017486
TU113159 other downstream 4017265 6729738 ~ 7184790 (+) False AMCG00017486
TU113167 other downstream 4017265 6729738 ~ 7184790 (+) False AMCG00017486

Expression Profile