RNA id: AMCG00017455


Basic Information

Item Value
RNA id AMCG00017455
length 471
RNA type mRNA
GC content 0.60
exon number 4
gene id AMCG00017455
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4906814 ~ 4914079 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACGGCACCCATGACGGGACCTCTGTGCCTTATCCCACCAAACTGACGTGCCAAACTGCGTCTCTATCTGGAGCAGCTGAAGCAGCTGGTGCCCCTGGGTCCAGACAGCACTAGACACACCACCCTGAGCCTCCTCAAAAGAGCCAAGATGCACATCAAGaaACTGGAGGAGCAGGACCGCAAGGCCGTCAATGTGAAGGAGCAGCTGCAGCGAGAGCACCGCTACCTCAAACGCCGGCTGGAGCAGCTGTCCATCCACGGCCTGGAGAGGATCCGCACAGACAGCATGGGCTCCACCATCTCCACGGACTCTGAGCAAGAGGTGGACATCGAGGGCATGGAGTTCACACCGGGGGAGATGGACAGCATGGGCAGTGTGAGCGACGGCGAAGACCACTACAGCCTGCAGGGCAGCTCCAGCGATGGCAGCTACACACATTCCCTCAGACTGCAGCCCCTCCTGTCCTAG

Function

GO: NA

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112709 lncRNA downstream 241647 4662836 ~ 4665167 (-) True G90411
TU112634 lncRNA downstream 516324 4384583 ~ 4390490 (-) True G90345
TU112644 lncRNA downstream 558502 4348094 ~ 4348312 (-) True G90355
TU112643 lncRNA downstream 559523 4346986 ~ 4347291 (-) True G90354
TU112594 lncRNA downstream 704007 4202607 ~ 4202807 (-) True G90307
TU112750 lncRNA upstream 15307 4929386 ~ 4937166 (-) True G90443
TU112856 lncRNA upstream 342010 5256089 ~ 5256406 (-) True G90520
TU112880 lncRNA upstream 441183 5355262 ~ 5356316 (-) True G90540
TU113031 lncRNA upstream 762820 5676899 ~ 5677249 (-) True G90648
TU113053 lncRNA upstream 865801 5779880 ~ 5780526 (-) True G90670
AMCG00017452 mRNA downstream 22465 4876511 ~ 4884349 (-) True AMCG00017452
AMCG00017453 mRNA downstream 44837 4692133 ~ 4861977 (-) True AMCG00017453
AMCG00017448 mRNA downstream 245656 4643696 ~ 4661158 (-) True AMCG00017448
AMCG00017447 mRNA downstream 286746 4601504 ~ 4620068 (-) True AMCG00017447
AMCG00017443 mRNA downstream 321857 4558905 ~ 4584957 (-) True AMCG00017443
AMCG00017460 mRNA upstream 56329 4970408 ~ 5010102 (-) True AMCG00017460
AMCG00017458 mRNA upstream 138213 5052292 ~ 5067312 (-) True AMCG00017458
AMCG00017459 mRNA upstream 294854 5208933 ~ 5209817 (-) True AMCG00017459
AMCG00017466 mRNA upstream 490765 5404844 ~ 5425674 (-) True AMCG00017466
AMCG00017467 mRNA upstream 546986 5461065 ~ 5465561 (-) True AMCG00017467
TU112697 other downstream 362054 4542775 ~ 4544760 (-) True G90400
TU112472 other downstream 2291290 2608689 ~ 2615524 (-) False AMCG00017418
TU112073 other downstream 4555028 245930 ~ 351786 (-) False AMCG00017384
TU112008 other downstream 4800929 105685 ~ 105885 (-) True G89804
TU112828 other upstream 244305 5158384 ~ 5221021 (-) False G90501
TU112835 other upstream 244305 5158384 ~ 5221021 (-) True G90501
TU112836 other upstream 308394 5222473 ~ 5223047 (-) True G90502
TU113104 other upstream 1473173 6387252 ~ 6389038 (-) True G90715
TU113210 other upstream 1974643 6888722 ~ 6914790 (-) False G90746

Expression Profile