RNA id: AMCG00017492


Basic Information

Item Value
RNA id AMCG00017492
length 483
RNA type mRNA
GC content 0.58
exon number 3
gene id AMCG00017492
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7489082 ~ 7491787 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCACAGCCCCTGGCACGTCCTGCTGGGCACTGTGGGACTTCTGTCCTCCACCCTCACTGCCCTCATCATTGGCCAGAACAGtaCATTCCTATACAGTGGTCTGTCTACTGTGTTGGGCCAATGGGACCTGCCCGTCGGTGTATTCCCCTTCAACATGGTTATCATGCTGTACCTGGCCTGCACTGGCACCTCCAACGCCTACTTCCCTCACCAACCTGTCCCACCTCCGGGCATGCTGGAGCACGGCAACCACACAGAGCTGGACATCACCAGGCTCCTTGTGGGGGTGCCAGTGGGCGTGGGGCAGGTCTACGCGTGTGATGAGCTGTGGGCATCCGTGGTGATCCTGGCAGCTGTCTTCCTCTTCTCCCCTCTGATGTGTGCCCATGCTCTGCTGGGCTCGGGCCTGGGCATCCTGGCCGGTAAGGGTCTCATCAGGACTTCCGAAGCTTTTTACTCAAGtctaaaatgtatgatttga

Function

GO:

id name namespace
GO:0071918 urea transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015204 urea transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113310 lncRNA downstream 164975 7323730 ~ 7324107 (-) True G90817
TU113297 lncRNA downstream 206605 7266067 ~ 7282477 (-) True G90805
TU113285 lncRNA downstream 262239 7221828 ~ 7226843 (-) True G90796
TU113271 lncRNA downstream 283221 7205620 ~ 7205861 (-) True G90783
TU113246 lncRNA downstream 364908 7065885 ~ 7124174 (-) True G90762
TU113391 lncRNA upstream 176393 7668180 ~ 7670591 (-) False AMCG00017497
TU113392 lncRNA upstream 201796 7693583 ~ 7694005 (-) True G90885
TU113416 lncRNA upstream 281431 7773218 ~ 7784195 (-) True G90908
TU113454 lncRNA upstream 336711 7828498 ~ 7830609 (-) True G90938
TU113465 lncRNA upstream 522608 8014395 ~ 8023105 (-) True G90948
AMCG00017490 mRNA downstream 35509 7451642 ~ 7453573 (-) True AMCG00017490
AMCG00017489 mRNA downstream 189137 7292856 ~ 7299945 (-) True AMCG00017489
AMCG00017487 mRNA downstream 267337 7210358 ~ 7221745 (-) True AMCG00017487
AMCG00017485 mRNA downstream 507822 6976937 ~ 6981260 (-) True AMCG00017485
AMCG00017481 mRNA downstream 715284 6772822 ~ 6773798 (-) True AMCG00017481
AMCG00017499 mRNA upstream 96164 7587951 ~ 7594082 (-) True AMCG00017499
AMCG00017500 mRNA upstream 133784 7625571 ~ 7639260 (-) True AMCG00017500
AMCG00017498 mRNA upstream 155859 7647646 ~ 7650108 (-) True AMCG00017498
AMCG00017501 mRNA upstream 166280 7658067 ~ 7660662 (-) True AMCG00017501
AMCG00017502 mRNA upstream 169059 7660846 ~ 7661833 (-) True AMCG00017502
TU113233 other downstream 375901 7112436 ~ 7113181 (-) True G90749
TU113210 other downstream 574292 6888722 ~ 6914790 (-) False G90746
TU113104 other downstream 1100044 6387252 ~ 6389038 (-) True G90715
TU112836 other downstream 2266035 5222473 ~ 5223047 (-) True G90502
TU112835 other downstream 2268061 5158384 ~ 5221021 (-) True G90501
TU113453 other upstream 339098 7830885 ~ 7832592 (-) True G90937
TU113456 other upstream 500350 7992137 ~ 7996595 (-) True G90939
TU113572 other upstream 1004708 8496495 ~ 8514955 (-) True AMCG00017520
TU113686 other upstream 1263501 8755288 ~ 8755907 (-) True G91119
TU113928 other upstream 2869513 10361300 ~ 10497104 (-) True AMCG00017556

Expression Profile