RNA id: AMCG00017501


Basic Information

Item Value
RNA id AMCG00017501
length 1188
RNA type mRNA
GC content 0.60
exon number 7
gene id AMCG00017501
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7658067 ~ 7660662 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATATGttatgagagacagagacagagtgtcCCTCCTGTGATCAGTGCTCTCTCTTCACAGGAAGAGAAACACGAGAAGTTGCTGCTCTACATCCTGTACACACAGGTGTGGAAGGATGAGTACCTGTCCTGGGACCCCTCTCAGTTTCAGGGGGTCCGCAGGGTGTCTGTACCAGTGCAGGACCTCTGGGTCCCTGACATCATTGTGTATGAGATGGCAGGTTTGGACGGCCCTCCCAGGTCCAGCTTGCTGTCTGTTTCTCACCGGGGGCAGGTGGAGCAGCGGCAGCCCCGTCTCTTGGTGTCCAGCTGCCCCCTCGACCTGCACGCCTTCCCCCTGGACTGGCACACCTGCAACCTGACCTTCAGCCCGCTGTCACACACAAaGGATGAGGTGCAGGTCCGGTTCAGCCCACTCTTCGTGGAGGTGAACAGTAACTGGGACAGCTCATTCGCTCGGGGGGAGTGGGAGCTGGTGTCCCTCTCCGTGCTCGGCCATCTGCCGCCTCTCCCCCCCAGCAACACATCTGCTGTGAGGGTCCAGGTGACCGTGCGCAGGAGGCCTTTACTCTACCTGGTCACTCTCCTCCTACCCAgcgccctcctcctcctcttggaCGGGCTGGCCTTCTTCATCCCCCCCTACTACAAGCAGAGGCTCAGCGTCAAGACAGCCATCTTCACCGGCCACTTCATCTTCCTCCTCATGGTCTTCAGTCTGTTCCCCCCCTTCAGGGGACAGCTGCCCCTCATCGGTGAGAACGGCACCATGGAAACGGCAGTCATATTTCAGACGTCCAATGGCAGGTGCAAGTGGGCGGAGAAATACATCTTCCCCTACCTATCACAGCTGTTGAGGATAGGCAGGTGGGAGGAGCCCAGCGCAAAAGGCAAGCACTTCAAGTCCATTCATCGGCCAGCGGAGGAAGTGATGGCAGGGGCTGGTGATGAAGGGAGGCTGGAGGGCAGCAAGGGGGCAGCCGTGGGCCAGAGGCAGCTGGCAGGGCTCCGGCGGGAGTTGGGCCGGGTGCGGTCAGAGCTGGAGAACATGCGACGAGGGCAGGACAGGCTGAGTCTGAGCCGGGAGTTGGGTACCGCCCTGGACAGCACCTACCTCTACCTGCACTGCTTCACCTTGCTGCTGGGGGGCGCTTTGCTCTACACAATGTGGCCCTGGAGGCTATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113310 lncRNA downstream 333960 7323730 ~ 7324107 (-) True G90817
TU113297 lncRNA downstream 375590 7266067 ~ 7282477 (-) True G90805
TU113285 lncRNA downstream 431224 7221828 ~ 7226843 (-) True G90796
TU113271 lncRNA downstream 452206 7205620 ~ 7205861 (-) True G90783
TU113246 lncRNA downstream 533893 7065885 ~ 7124174 (-) True G90762
TU113391 lncRNA upstream 7518 7668180 ~ 7670591 (-) False AMCG00017497
TU113392 lncRNA upstream 32921 7693583 ~ 7694005 (-) True G90885
TU113416 lncRNA upstream 112556 7773218 ~ 7784195 (-) True G90908
TU113454 lncRNA upstream 167836 7828498 ~ 7830609 (-) True G90938
TU113465 lncRNA upstream 353733 8014395 ~ 8023105 (-) True G90948
AMCG00017498 mRNA downstream 7959 7647646 ~ 7650108 (-) True AMCG00017498
AMCG00017500 mRNA downstream 18807 7625571 ~ 7639260 (-) True AMCG00017500
AMCG00017499 mRNA downstream 63985 7587951 ~ 7594082 (-) True AMCG00017499
AMCG00017492 mRNA downstream 166280 7489082 ~ 7491787 (-) True AMCG00017492
AMCG00017490 mRNA downstream 204494 7451642 ~ 7453573 (-) True AMCG00017490
AMCG00017502 mRNA upstream 184 7660846 ~ 7661833 (-) True AMCG00017502
AMCG00017497 mRNA upstream 7362 7668024 ~ 7679350 (-) True AMCG00017497
AMCG00017504 mRNA upstream 94995 7755657 ~ 7776355 (-) True AMCG00017504
AMCG00017505 mRNA upstream 120390 7781052 ~ 7793599 (-) True AMCG00017505
AMCG00017507 mRNA upstream 182984 7843646 ~ 7851221 (-) True AMCG00017507
TU113233 other downstream 544886 7112436 ~ 7113181 (-) True G90749
TU113210 other downstream 743277 6888722 ~ 6914790 (-) False G90746
TU113104 other downstream 1269029 6387252 ~ 6389038 (-) True G90715
TU112836 other downstream 2435020 5222473 ~ 5223047 (-) True G90502
TU112835 other downstream 2437046 5158384 ~ 5221021 (-) True G90501
TU113453 other upstream 170223 7830885 ~ 7832592 (-) True G90937
TU113456 other upstream 331475 7992137 ~ 7996595 (-) True G90939
TU113572 other upstream 835833 8496495 ~ 8514955 (-) True AMCG00017520
TU113686 other upstream 1094626 8755288 ~ 8755907 (-) True G91119
TU113928 other upstream 2700638 10361300 ~ 10497104 (-) True AMCG00017556

Expression Profile