RNA id: AMCG00017556



Basic Information


Item Value
RNA id AMCG00017556
length 297
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00017556
representative False

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 10361300 ~ 10497104 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCTGTGAGAACATCACCAGAAAGAAGGCAGAAGAACCAGCCAAAGCTCTCCACTTTCATGCCCAACACTGAACAAGGCAGCCAGGAAAAGCTTGCCAATGGAGACCCCCCACTCATGGGTGATCGCAACAGAAACCTGCTGAGCAAAAAGATGACGTCATCTTACGAGACCTTCAGCACAGCAAGCTTTGGCAAAAACGAGGATGCCCACCCAGAGGATATACCACTTACGCAAACAGGGGAGTACAAACCGTCTCCCGTTAGTACCCTCACCAGACGGGAAGTATACCTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113927 lncRNA downstream 823 10357400 ~ 10361148 (-) True G91321
TU113917 lncRNA downstream 64163 10297405 ~ 10297808 (-) True G91311
TU113907 lncRNA downstream 681750 9677471 ~ 9680221 (-) True G91301
TU113906 lncRNA downstream 686192 9675546 ~ 9675779 (-) True G91300
TU113904 lncRNA downstream 699183 9662564 ~ 9662788 (-) True G91298
TU113962 lncRNA upstream 705446 11067713 ~ 11068015 (-) True G91354
TU113963 lncRNA upstream 789111 11151378 ~ 11151698 (-) True G91355
TU113967 lncRNA upstream 905839 11268106 ~ 11268595 (-) True G91359
TU113970 lncRNA upstream 925588 11287855 ~ 11288163 (-) True G91362
TU113985 lncRNA upstream 928061 11290328 ~ 11291234 (-) True G91371
AMCG00017554 mRNA downstream 814657 9495728 ~ 9547314 (-) True AMCG00017554
AMCG00017550 mRNA downstream 989892 9342114 ~ 9372079 (-) True AMCG00017550
AMCG00017548 mRNA downstream 1076468 9245216 ~ 9285503 (-) True AMCG00017548
AMCG00017549 mRNA downstream 1130218 9229000 ~ 9231753 (-) True AMCG00017549
AMCG00017547 mRNA downstream 1177225 9164861 ~ 9184746 (-) True AMCG00017547
AMCG00017555 mRNA upstream 125030 10487297 ~ 10496150 (-) True AMCG00017555
AMCG00017559 mRNA upstream 585479 10947746 ~ 10948005 (-) True AMCG00017559
AMCG00017558 mRNA upstream 585843 10948110 ~ 10949709 (-) True AMCG00017558
AMCG00017557 mRNA upstream 931341 11293608 ~ 11315800 (-) True AMCG00017557
AMCG00017572 mRNA upstream 994538 11356805 ~ 11387412 (-) True AMCG00017572
TU113686 other downstream 1606064 8755288 ~ 8755907 (-) True G91119
TU113572 other downstream 1847016 8496495 ~ 8514955 (-) True AMCG00017520
TU113456 other downstream 2365376 7992137 ~ 7996595 (-) True G90939
TU113453 other downstream 2529379 7830885 ~ 7832592 (-) True G90937
TU113233 other downstream 3248790 7112436 ~ 7113181 (-) True G90749
TU114641 other upstream 4070891 14433158 ~ 14479787 (-) True AMCG00017631
TU114907 other upstream 5504680 15866947 ~ 15867647 (-) True G92124
TU114913 other upstream 5668135 16030402 ~ 16030905 (-) True G92129
TU114912 other upstream 5668189 16030456 ~ 16030905 (-) False G92129
TU115048 other upstream 7106338 17468605 ~ 17474339 (-) False AMCG00017665

Expression Profile