RNA id: AMCG00017655



Basic Information


Item Value
RNA id AMCG00017655
length 204
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00017655
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15193702 ~ 15194164 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGGCCTAGCCAGGGCAGGgagGAGGTGCAGGGGGAGGAGTACCCCGCAGTGATCGTGGAGCCCGTACCCAGTGCTCGTCTGGAGCAGTGCTATGCAGCGCAAGTCCTTGTCTATGATGATGAGACTTACCTGATGCAAGATGTGGCCGAGGAACAGGAGATTGAGACTGAAGTCGTGGAATCTGGTAGGACTGGTATTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114831 lncRNA upstream 31010 15162330 ~ 15162692 (+) True G92059
TU114826 lncRNA upstream 86867 15093265 ~ 15106835 (+) True AMCG00017652
TU114827 lncRNA upstream 86867 15093265 ~ 15106835 (+) False AMCG00017652
TU114822 lncRNA upstream 103227 15088132 ~ 15090475 (+) False AMCG00017651
TU114805 lncRNA upstream 108304 15062297 ~ 15085398 (+) True G92038
TU114878 lncRNA downstream 333397 15527561 ~ 15527878 (+) True G92095
TU114917 lncRNA downstream 972478 16166642 ~ 16182070 (+) True G92133
TU114933 lncRNA downstream 1120890 16315054 ~ 16315523 (+) True G92145
TU114935 lncRNA downstream 1236288 16430452 ~ 16430712 (+) True G92147
TU114939 lncRNA downstream 1409487 16603651 ~ 16603919 (+) True G92151
AMCG00017653 mRNA upstream 37009 15131423 ~ 15156693 (+) True AMCG00017653
AMCG00017650 mRNA upstream 77672 15109422 ~ 15116030 (+) True AMCG00017650
AMCG00017652 mRNA upstream 90708 15093191 ~ 15102994 (+) False AMCG00017652
AMCG00017651 mRNA upstream 102873 15088147 ~ 15090829 (+) True AMCG00017651
AMCG00017643 mRNA upstream 131421 15053366 ~ 15062281 (+) True AMCG00017643
AMCG00017654 mRNA downstream 13445 15207609 ~ 15212259 (+) True AMCG00017654
AMCG00017657 mRNA downstream 405255 15599419 ~ 15605110 (+) True AMCG00017657
AMCG00017658 mRNA downstream 415819 15609983 ~ 15794447 (+) True AMCG00017658
AMCG00017656 mRNA downstream 634765 15828929 ~ 15835050 (+) True AMCG00017656
AMCG00017662 mRNA downstream 2201567 17395731 ~ 17428335 (+) True AMCG00017662
TU114828 other upstream 77671 15112610 ~ 15116031 (+) False AMCG00017650
TU114814 other upstream 109424 15077325 ~ 15084278 (+) True G92046
TU114568 other upstream 1154639 14036876 ~ 14039063 (+) False AMCG00017620
TU114078 other upstream 3313203 11879614 ~ 11880499 (+) True G91452
TU113887 other upstream 5610422 9519773 ~ 9583280 (+) True G91281
TU114906 other downstream 672867 15867031 ~ 15867634 (+) True G92123
TU114914 other downstream 940861 16135025 ~ 16135316 (+) True G92130
TU115097 other downstream 2407371 17601535 ~ 17606208 (+) False AMCG00017668
TU115411 other downstream 3879074 19073238 ~ 19073662 (+) True G92538
TU115469 other downstream 4207922 19402086 ~ 19411990 (+) False AMCG00017710

Expression Profile