Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00017710 |
| length | 1383 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 11 |
| gene id | AMCG00017710 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 19396028 ~ 19433103 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016051 | carbohydrate biosynthetic process | biological_process |
| GO:0008781 | N-acylneuraminate cytidylyltransferase activity | molecular_function |
| GO:0047444 | N-acylneuraminate-9-phosphate synthase activity | molecular_function |
| GO:0050462 | N-acetylneuraminate synthase activity | molecular_function |
| id | description |
|---|---|
| K05304 | NANS, SAS; sialic acid synthase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115447 | lncRNA | upstream | 18133 | 19348142 ~ 19383974 (+) | True | G92566 |
| TU115427 | lncRNA | upstream | 202861 | 19191195 ~ 19199246 (+) | True | G92552 |
| TU115409 | lncRNA | upstream | 397570 | 19001740 ~ 19004537 (+) | True | G92536 |
| TU115368 | lncRNA | upstream | 543877 | 18857946 ~ 18858230 (+) | True | G92502 |
| TU115338 | lncRNA | upstream | 597052 | 18804312 ~ 18805055 (+) | True | G92475 |
| TU115512 | lncRNA | downstream | 177945 | 19611048 ~ 19611287 (+) | True | G92607 |
| TU115529 | lncRNA | downstream | 220102 | 19653205 ~ 19654620 (+) | True | G92620 |
| TU115536 | lncRNA | downstream | 222323 | 19655426 ~ 19659453 (+) | True | G92622 |
| TU115583 | lncRNA | downstream | 453966 | 19887069 ~ 19887346 (+) | True | G92664 |
| TU115591 | lncRNA | downstream | 469502 | 19902605 ~ 19948371 (+) | True | G92670 |
| AMCG00017708 | mRNA | upstream | 38865 | 19352888 ~ 19363242 (+) | True | AMCG00017708 |
| AMCG00017705 | mRNA | upstream | 405175 | 18969596 ~ 18996932 (+) | True | AMCG00017705 |
| AMCG00017706 | mRNA | upstream | 494812 | 18896486 ~ 18907295 (+) | True | AMCG00017706 |
| AMCG00017693 | mRNA | upstream | 910557 | 18483471 ~ 18491550 (+) | True | AMCG00017693 |
| AMCG00017692 | mRNA | upstream | 938160 | 18460767 ~ 18463947 (+) | True | AMCG00017692 |
| AMCG00017712 | mRNA | downstream | 11425 | 19444528 ~ 19445098 (+) | False | AMCG00017712 |
| AMCG00017714 | mRNA | downstream | 168366 | 19601469 ~ 19609786 (+) | True | AMCG00017714 |
| AMCG00017713 | mRNA | downstream | 184937 | 19618040 ~ 19633716 (+) | True | AMCG00017713 |
| AMCG00017717 | mRNA | downstream | 250690 | 19683793 ~ 19694234 (+) | True | AMCG00017717 |
| AMCG00017721 | mRNA | downstream | 339309 | 19772412 ~ 19773351 (+) | True | AMCG00017721 |
| TU115411 | other | upstream | 328445 | 19073238 ~ 19073662 (+) | True | G92538 |
| TU115097 | other | upstream | 1795899 | 17601535 ~ 17606208 (+) | False | AMCG00017668 |
| TU114914 | other | upstream | 3266791 | 16135025 ~ 16135316 (+) | True | G92130 |
| TU114906 | other | upstream | 3534473 | 15867031 ~ 15867634 (+) | True | G92123 |
| TU114828 | other | upstream | 4286076 | 15112610 ~ 15116031 (+) | False | AMCG00017650 |
| TU115510 | other | downstream | 11069 | 19444172 ~ 19528293 (+) | True | AMCG00017712 |
| TU115788 | other | downstream | 1366492 | 20799595 ~ 20815546 (+) | False | AMCG00017747 |
| TU115792 | other | downstream | 1387408 | 20820511 ~ 20821947 (+) | False | AMCG00017747 |
| TU116638 | other | downstream | 5272276 | 24705379 ~ 24715621 (+) | False | AMCG00017829 |
| TU117380 | other | downstream | 9209627 | 28642730 ~ 28643983 (+) | False | AMCG00017910 |
