RNA id: AMCG00017769



Basic Information


Item Value
RNA id AMCG00017769
length 291
RNA type mRNA
GC content 0.49
exon number 1
gene id AMCG00017769
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22596047 ~ 22596337 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTAAAGGTCTTGATGTATGTCTTTGACAAGTTGAGGTCAGGAGAAACAGCAGCGATCATTGCAAGGGAGCTTTCGGAGCAGACCAAGAGTCAGATCCATGCAGGGGACATCTCGTACACGGTCAAGGCCATGGACCAGCTGGTGGACTTGCTGGATGTGCAACTCAGGAACCTTACCCCTGGAGGAAAAGACAGCGCTGCCCGCAGTTTAAATAAGGTAAGCGTCATCTACGCAATATTGTGCTCCATCTCACCTCACATATTCGAAGCCTATGCACCCGATAAGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU115956 lncRNA upstream 364155 22231457 ~ 22231892 (+) True G92956
TU115954 lncRNA upstream 375268 22220524 ~ 22220779 (+) True G92954
TU115952 lncRNA upstream 443467 22152321 ~ 22152580 (+) True G92952
TU115840 lncRNA upstream 1467067 21128700 ~ 21128980 (+) True G92878
TU115808 lncRNA upstream 1710779 20883937 ~ 20885268 (+) True G92849
TU116054 lncRNA downstream 181391 22777728 ~ 22778103 (+) True G93027
TU116068 lncRNA downstream 281741 22878078 ~ 22878468 (+) True G93039
TU116134 lncRNA downstream 705278 23301615 ~ 23328984 (+) True AMCG00017783
TU116140 lncRNA downstream 724114 23320451 ~ 23321055 (+) False G93100
TU116141 lncRNA downstream 724114 23320451 ~ 23321055 (+) False G93100
AMCG00017764 mRNA upstream 2067 22590793 ~ 22593980 (+) True AMCG00017764
AMCG00017767 mRNA upstream 33086 22562011 ~ 22562961 (+) True AMCG00017767
AMCG00017762 mRNA upstream 322691 22269271 ~ 22273356 (+) True AMCG00017762
AMCG00017760 mRNA upstream 332529 22257375 ~ 22263518 (+) True AMCG00017760
AMCG00017761 mRNA upstream 341963 22156801 ~ 22254084 (+) True AMCG00017761
AMCG00017768 mRNA downstream 19585 22615922 ~ 22640911 (+) True AMCG00017768
AMCG00017765 mRNA downstream 64729 22661066 ~ 22668453 (+) True AMCG00017765
AMCG00017766 mRNA downstream 90221 22686558 ~ 22687322 (+) True AMCG00017766
AMCG00017772 mRNA downstream 410686 23007023 ~ 23020463 (+) True AMCG00017772
AMCG00017774 mRNA downstream 505625 23101962 ~ 23129457 (+) True AMCG00017774
TU115792 other upstream 1774100 20820511 ~ 20821947 (+) False AMCG00017747
TU115788 other upstream 1780501 20799595 ~ 20815546 (+) False AMCG00017747
TU115510 other upstream 3067754 19444172 ~ 19528293 (+) True AMCG00017712
TU115496 other upstream 3172368 19421310 ~ 19423679 (+) False AMCG00017710
TU115469 other upstream 3184057 19402086 ~ 19411990 (+) False AMCG00017710
TU116638 other downstream 2109042 24705379 ~ 24715621 (+) False AMCG00017829
TU117380 other downstream 6046393 28642730 ~ 28643983 (+) False AMCG00017910
TU117593 other downstream 6837075 29433412 ~ 29450347 (+) True G94275
TU118260 other downstream 9811092 32407429 ~ 32411373 (+) False AMCG00018012
TU118291 other downstream 9864961 32461298 ~ 32465063 (+) True G94838

Expression Profile