RNA id: AMCG00017811


Basic Information

Item Value
RNA id AMCG00017811
length 1955
RNA type mRNA
GC content 0.47
exon number 5
gene id AMCG00017811
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23875123 ~ 23884454 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTTCTGAATATATAATCATAGCTTCTATAgaataatgaaatatgtattcatgtagTTTAAAGCCCTACATAAAATGCTGCATTAACAGGAACTGCAAAACGTTATTATACAAGTGTATTCATCATGTTCATATGTAGCAGtttcatatataatattgatatatatatttaggaagTGGTGTTAGTTGGGACATTTAACCAGTGAAGGCGATCATCAGTGGTAGGTTTTCTGGGCGGGGTCGCTTCAGTAAAAGTGCGCCCAGTCAGACTGGTCCCTCAGATTGTGCTGTCCATAGTGAAAGCGCACAGCCTGGCACTGGACCCCGCTACCTCTACAGGATGCTCGCTTTCCTTGCTCTGGTCGTGTCCTTGTCCTATGTGGCCGGTGACCGCGGTTGCCCACCCTGCCAACCCAGCCTGTGCGCCCCTCTCCCGGCGGAGGGCTGCCAGCAGGGCACGGTGACGGACCTGTGCGGGTGCTGCTCTGTGTGCGCCGCCGGCCAGGGGGAGCCGTGCGGGGGACGCGGCGGCTCTCCGAAGCGCTGCGGGGCCGGGATGGAGTGCGTGAAGAGCGGCAAGGGGAAGCGGGGGACGTGCGTGTGCAAGAGCGGCTACGAGGTGTGCGGCAGCGACGGGGTGACTTACGGTAATGTGTGTGAGATGAGAGCCGCCAGCAGGAGAGCCGTGGACGGGGAGCAAAGCGAGATCAAGGTGCTCAAAAAAGGCAAATGCGAACGAGCACCTGTTATCGTGACTCCCCCTAAAGAGATCTGGAACGTGACGGGAGCTCAGGTCTTCCTCAGCTGTGAAGCGATAGGAGTCCCGACCCCTGTCCTCGTCTGGAAAAAGATTTTAACTACGAGCAAAGGTGTGGAGAACTTAGAGCTACTGCCCGGGGACCGTGACAACCTGGCCATCCAGACTCGCGGCGGGCCGGAGAAGCACGAGGTGACGGGCTGGGTGCTGATTTCCCCTCTCTCCAAGCTGGATGCTGGGGATTACGAGTGCCACGCCACAAACTCCAAAGGACAGGTATCTGCTGTGGGCAGCATCCACGTGCTCAGGAAGATGAACTGTGAGTCTGTGAGGGGGAGCGTGGGATCAGCAGCAGCACCCCCCCAGGAGAGAGACACTCCTGTCAGCACTGACGCCTGCCCCGAGATCCGCTCCTAAAAACACTAACCCAACTCTCCCTTTAACATATCCACATTGGAGCCATATGTCTTCCACTATACAATATTTAACCtatattccattttattttgtattgtattattatgatagATAACACCTTAAGATGTGCCTCTGTAACGGCTTTCTCTTTGGGAATCAGGTCCCACAATGTAGTGTCTGACTAGTCAAAACAACACTAGGTGCTCTAGCTGTACAGACAAATTGTATTACAGAACCTTAgaacatgataaataaatataaatatcctaGTTATGTATATCTTCTTATTTCTGCTGGTtgaatgttgtgtgtgttatattCTTTGTGGATATTTCCAACCACCTTGTTTGCCACGAATAACAAATCggaataatgaaataataattcaggCCTGAATGAcgggacaaaaataaacatgaccaCTGGAATGACagacaaattatataataatgtgaACATGTTAAGTGGATTTTTTCAGTATTAAGAGGAAACAGGGAAGCTGCCAAGTGTTATACAAGCTCAGGACTTGAAAAGGTTACGATGTCATGTaatcataaaaacacatcacagagAATATTGTTCAGTCTTTCAATTTATAGGTATGTCTGTACACTGGCTTATATTTCCAACAGGTTAGTGTTTTGACCATAGATCATTTCAATGTCATTGTTCAATATAGCACTCATTGAAAactcattttttattaaatctaaGGACTTAAATCACAAAGGACTTATCACTCCTCAATGCTACAGATACAGCACatctatgttaaaaaaaaa

Function

GO: NA

KEGG:

id description
K23580 IGFBP7; insulin-like growth factor-binding protein 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU116235 lncRNA downstream 335003 23444211 ~ 23540120 (-) True G93173
TU116222 lncRNA downstream 545379 23326525 ~ 23329744 (-) True G93165
TU116205 lncRNA downstream 578877 23295800 ~ 23296246 (-) True G93159
TU116130 lncRNA downstream 579754 23294819 ~ 23295369 (-) True G93092
TU116128 lncRNA downstream 584442 23290332 ~ 23290681 (-) True G93090
TU116417 lncRNA upstream 23121 23907575 ~ 23910679 (-) True G93324
TU116446 lncRNA upstream 150242 24034696 ~ 24037610 (-) True G93350
TU116452 lncRNA upstream 159740 24044194 ~ 24046369 (-) True G93355
TU116513 lncRNA upstream 380918 24265372 ~ 24266487 (-) False AMCG00017819
TU116522 lncRNA upstream 416966 24301420 ~ 24301980 (-) True G93399
AMCG00017804 mRNA downstream 11467 23857838 ~ 23863656 (-) True AMCG00017804
AMCG00017806 mRNA downstream 34960 23821734 ~ 23840163 (-) True AMCG00017806
AMCG00017808 mRNA downstream 62675 23795913 ~ 23812448 (-) True AMCG00017808
AMCG00017805 mRNA downstream 114886 23750371 ~ 23760237 (-) True AMCG00017805
AMCG00017807 mRNA downstream 184687 23671644 ~ 23690436 (-) True AMCG00017807
AMCG00017812 mRNA upstream 730 23885184 ~ 23893945 (-) True AMCG00017812
AMCG00017815 mRNA upstream 164368 24048822 ~ 24053932 (-) True AMCG00017815
AMCG00017818 mRNA upstream 235023 24119477 ~ 24253084 (-) True AMCG00017818
AMCG00017819 mRNA upstream 380225 24264679 ~ 24270595 (-) True AMCG00017819
AMCG00017824 mRNA upstream 556082 24440536 ~ 24568029 (-) True AMCG00017824
TU116215 other downstream 553169 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other downstream 553169 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other downstream 553169 23318126 ~ 23321954 (-) False AMCG00017780
TU115494 other downstream 4455767 19412987 ~ 19419356 (-) False G92591
TU116981 other upstream 2128207 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 2128207 26012661 ~ 26015492 (-) False AMCG00017866
TU117033 other upstream 2219572 26104026 ~ 26107805 (-) True G93795
TU117034 other upstream 2224606 26109060 ~ 26110074 (-) True G93796
TU117337 other upstream 4218845 28103299 ~ 28144589 (-) True AMCG00017906

Expression Profile