Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00017812 |
| length | 1250 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | AMCG00017812 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 23885184 ~ 23893945 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006955 | immune response | biological_process |
| GO:0051205 | protein insertion into membrane | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008009 | chemokine activity | molecular_function |
| id | description |
|---|---|
| K17797 | COX18; mitochondrial inner membrane protein COX18 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116235 | lncRNA | downstream | 345064 | 23444211 ~ 23540120 (-) | True | G93173 |
| TU116222 | lncRNA | downstream | 555440 | 23326525 ~ 23329744 (-) | True | G93165 |
| TU116205 | lncRNA | downstream | 588938 | 23295800 ~ 23296246 (-) | True | G93159 |
| TU116130 | lncRNA | downstream | 589815 | 23294819 ~ 23295369 (-) | True | G93092 |
| TU116128 | lncRNA | downstream | 594503 | 23290332 ~ 23290681 (-) | True | G93090 |
| TU116417 | lncRNA | upstream | 13630 | 23907575 ~ 23910679 (-) | True | G93324 |
| TU116446 | lncRNA | upstream | 140751 | 24034696 ~ 24037610 (-) | True | G93350 |
| TU116452 | lncRNA | upstream | 150249 | 24044194 ~ 24046369 (-) | True | G93355 |
| TU116513 | lncRNA | upstream | 371427 | 24265372 ~ 24266487 (-) | False | AMCG00017819 |
| TU116522 | lncRNA | upstream | 407475 | 24301420 ~ 24301980 (-) | True | G93399 |
| AMCG00017811 | mRNA | downstream | 730 | 23875123 ~ 23884454 (-) | True | AMCG00017811 |
| AMCG00017804 | mRNA | downstream | 21528 | 23857838 ~ 23863656 (-) | True | AMCG00017804 |
| AMCG00017806 | mRNA | downstream | 45021 | 23821734 ~ 23840163 (-) | True | AMCG00017806 |
| AMCG00017808 | mRNA | downstream | 72736 | 23795913 ~ 23812448 (-) | True | AMCG00017808 |
| AMCG00017805 | mRNA | downstream | 124947 | 23750371 ~ 23760237 (-) | True | AMCG00017805 |
| AMCG00017815 | mRNA | upstream | 154877 | 24048822 ~ 24053932 (-) | True | AMCG00017815 |
| AMCG00017818 | mRNA | upstream | 225532 | 24119477 ~ 24253084 (-) | True | AMCG00017818 |
| AMCG00017819 | mRNA | upstream | 370734 | 24264679 ~ 24270595 (-) | True | AMCG00017819 |
| AMCG00017824 | mRNA | upstream | 546591 | 24440536 ~ 24568029 (-) | True | AMCG00017824 |
| AMCG00017827 | mRNA | upstream | 697072 | 24591017 ~ 24596789 (-) | True | AMCG00017827 |
| TU116215 | other | downstream | 563230 | 23318126 ~ 23321954 (-) | True | AMCG00017780 |
| TU116216 | other | downstream | 563230 | 23318126 ~ 23321954 (-) | False | AMCG00017780 |
| TU116217 | other | downstream | 563230 | 23318126 ~ 23321954 (-) | False | AMCG00017780 |
| TU115494 | other | downstream | 4465828 | 19412987 ~ 19419356 (-) | False | G92591 |
| TU116981 | other | upstream | 2118716 | 26012661 ~ 26015492 (-) | False | AMCG00017866 |
| TU116982 | other | upstream | 2118716 | 26012661 ~ 26015492 (-) | False | AMCG00017866 |
| TU117033 | other | upstream | 2210081 | 26104026 ~ 26107805 (-) | True | G93795 |
| TU117034 | other | upstream | 2215115 | 26109060 ~ 26110074 (-) | True | G93796 |
| TU117337 | other | upstream | 4209354 | 28103299 ~ 28144589 (-) | True | AMCG00017906 |
