RNA id: AMCG00017839


Basic Information

Item Value
RNA id AMCG00017839
length 546
RNA type mRNA
GC content 0.47
exon number 3
gene id AMCG00017839
representative False

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 24946095 ~ 24949136 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAAAAAGCGTGTCTTTGTTACAGAATGTGATTCTTTGTTAGCTGCatcatgctgtttttgttttaatctatatttaaagCTAAATGCATGTGGCAGGATGGTGCATGGTCAATGCGGTCTTGCAATCGAGCCACTCTATCCTTGTTGCTGCTTGGGGCTGAACAATTCCAGCAGggtttttattgcactttatatttttcatgtttattctgTAGACGACCTTGAGGTGTAGGGGGTTTAAAGCATCCAATGGAAATATTCAAACAGCTTCATTGACCAGAAATGGCAGACAAACCAGACCTGAAGGAGATCTCCGGCTTTGATAAGACCAAGCTGAAGAAGACGGAGACCAATGAGAAGAACACGCTTCCCACAAAAGAGAGCTTTCTCTCCCGCACACGTGTGTTTTGCTGCAGTGCTGTAAGCCGAGCCAGGAGGAGGCAGACGGTGTTAAACCTGACCTCTGGGGTGACGGACATAAGGCACTCCCATCCCTCCTTCGTCCCCTGCCCCCAGCAGACAGCAGAGTGTGCGAGGGAGCAGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU116771 lncRNA downstream 18907 24922467 ~ 24927188 (-) True G93576
TU116683 lncRNA downstream 215873 24725938 ~ 24730222 (-) True G93509
TU116675 lncRNA downstream 215873 24728842 ~ 24730222 (-) False G93509
TU116666 lncRNA downstream 266195 24677165 ~ 24679900 (-) True G93500
TU116575 lncRNA downstream 440485 24505382 ~ 24505610 (-) True G93434
TU116793 lncRNA upstream 926 24949968 ~ 24950248 (-) True G93591
TU116811 lncRNA upstream 58642 25007684 ~ 25009604 (-) False AMCG00017844
TU116851 lncRNA upstream 157760 25106802 ~ 25107082 (-) True G93639
TU116853 lncRNA upstream 161848 25110890 ~ 25111090 (-) True G93641
TU116881 lncRNA upstream 423891 25372933 ~ 25381038 (-) True G93660
AMCG00017837 mRNA downstream 3462 24928171 ~ 24942633 (-) True AMCG00017837
AMCG00017836 mRNA downstream 27269 24903782 ~ 24918826 (-) True AMCG00017836
AMCG00017840 mRNA downstream 106948 24799083 ~ 24839147 (-) True AMCG00017840
AMCG00017838 mRNA downstream 157754 24759381 ~ 24788341 (-) True AMCG00017838
AMCG00017832 mRNA downstream 206594 24732695 ~ 24739501 (-) True AMCG00017832
AMCG00017845 mRNA upstream 16432 24965474 ~ 24986772 (-) True AMCG00017845
AMCG00017844 mRNA upstream 48502 24997544 ~ 25018212 (-) True AMCG00017844
AMCG00017846 mRNA upstream 126563 25075605 ~ 25080431 (-) True AMCG00017846
AMCG00017851 mRNA upstream 146156 25095198 ~ 25100631 (-) True AMCG00017851
AMCG00017850 mRNA upstream 151791 25100833 ~ 25105142 (-) True AMCG00017850
TU116215 other downstream 1624141 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other downstream 1624141 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other downstream 1624141 23318126 ~ 23321954 (-) False AMCG00017780
TU115494 other downstream 5526739 19412987 ~ 19419356 (-) False G92591
TU116981 other upstream 1063619 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 1063619 26012661 ~ 26015492 (-) False AMCG00017866
TU117033 other upstream 1154984 26104026 ~ 26107805 (-) True G93795
TU117034 other upstream 1160018 26109060 ~ 26110074 (-) True G93796
TU117337 other upstream 3154257 28103299 ~ 28144589 (-) True AMCG00017906

Expression Profile