RNA id: AMCG00017851



Basic Information


Item Value
RNA id AMCG00017851
length 1159
RNA type mRNA
GC content 0.57
exon number 9
gene id AMCG00017851
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25095198 ~ 25100631 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cTGCTCTGCATTGGCCGCTGTTGCACGGCAGCGCGGAGGACACCAGGGGGCGCTCTGCTCTCCTGCAACACACGTCTGCACACGGCGCTGCGCACGCCTGCGGGACTGGAGCCGGGGCTCACACTTACAGTTGCTTTCATTTTCTGCGTCCTTGACAGAAGTGTTTGCTTTTGAGTGCATTGGGCTGAGCATCGTTTGCGCCGTAATGAAGGCCGCTCGGCAGCTCCTGAAGGTGTTTGTGACCAGAAGGATTCCCCAGGAAGGACTGAAGGCGCTGTCTCTTTCTGGACTTTGTGATGTCCAGCTGTGGGACTCTGATGAACCTGTGCCCAAAGATGAGTTACTGAAAGGAGTGTCAGGGGCACATGGACTCCTCTGTCTTCTCTCGGAAAAGATTGATCAGGAAGTCCTGGATGCAGCAGGCATGTTGTCTCGACGACCCAATCTGAAAGTGATCAGCACACTCTCTGTTGGCTTTGACCACCTTGCCATCGACGAGATCAAAAAACGGGGTGTAAGAGTGGGCTACACCCCCGATGTGTTGACGGATGCCACCGCTGAGCTCACTGTGGCTCTCCTACTGGCCTCATCGCGCAGGATCCCAGAGGCAGTGGAGGAGCCCCTCTGGCTGTGCGGCTATGGTCTGTCTGAGAGCACGGTGGGCGTCATTGGTCTCGGACGAATAGGTTTGGCCATTGCCAAGAGGCTAAAGCCCTTCGGGGTAAAGAATCTGCTCTATTGGGGGCGCGCGGCCAAACCAAAGGCGGCAGAGGTGGATGGGGAGTTTGTGCCTTTGGACAGACTACTCGAAGAGTCCGACTTCGTGGTCGTGTCTTGTGCTCTGACACCTGAAACTCAGGGACTGTGCAACAAGGCCTTCTTCACCAAGATGAAGAAAACCGCCGTGTTTGTCAATTCCAGCAGaggcaccgtggtgaaccaggaGGACCTGTATGAGGCTCTGTCCAGCGGGGAGATTGCAGCCGCTGGTCTGGACGTCACCACCCCCGAGCCCCTGCCCACTGACCACCCACTGCTCAAGCTGAAGAACTGTGGCAGCGCCACATACTCCACGAGAGAGACCATGTCTGTGCTGGCAGCCAATAACCTCCTGGCAGGGCTGACGGGGGGGAAGATGCCAAGCGAGCTCTCTCTGTGA

Function


GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0051287 NAD binding molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K00049 GRHPR; glyoxylate/hydroxypyruvate reductase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU116811 lncRNA downstream 85594 25007684 ~ 25009604 (-) False AMCG00017844
TU116793 lncRNA downstream 144950 24949968 ~ 24950248 (-) True G93591
TU116791 lncRNA downstream 146062 24947658 ~ 24949136 (-) True AMCG00017839
TU116771 lncRNA downstream 168010 24922467 ~ 24927188 (-) True G93576
TU116675 lncRNA downstream 364976 24728842 ~ 24730222 (-) False G93509
TU116851 lncRNA upstream 6171 25106802 ~ 25107082 (-) True G93639
TU116853 lncRNA upstream 10259 25110890 ~ 25111090 (-) True G93641
TU116881 lncRNA upstream 272302 25372933 ~ 25381038 (-) True G93660
TU116912 lncRNA upstream 416655 25517286 ~ 25517600 (-) True G93689
TU116944 lncRNA upstream 708913 25809544 ~ 25809853 (-) True G93718
AMCG00017846 mRNA downstream 14767 25075605 ~ 25080431 (-) True AMCG00017846
AMCG00017844 mRNA downstream 76986 24997544 ~ 25018212 (-) True AMCG00017844
AMCG00017845 mRNA downstream 108426 24965474 ~ 24986772 (-) True AMCG00017845
AMCG00017839 mRNA downstream 146156 24946095 ~ 24949042 (-) False AMCG00017839
AMCG00017837 mRNA downstream 152565 24928171 ~ 24942633 (-) True AMCG00017837
AMCG00017850 mRNA upstream 202 25100833 ~ 25105142 (-) True AMCG00017850
AMCG00017852 mRNA upstream 15307 25115938 ~ 25224281 (-) True AMCG00017852
AMCG00017855 mRNA upstream 246189 25346820 ~ 25366550 (-) True AMCG00017855
AMCG00017862 mRNA upstream 722345 25822976 ~ 25923225 (-) True AMCG00017862
AMCG00017861 mRNA upstream 845129 25945760 ~ 25957648 (-) True AMCG00017861
TU116215 other downstream 1773244 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other downstream 1773244 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other downstream 1773244 23318126 ~ 23321954 (-) False AMCG00017780
TU115494 other downstream 5675842 19412987 ~ 19419356 (-) False G92591
TU116981 other upstream 912030 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 912030 26012661 ~ 26015492 (-) False AMCG00017866
TU117033 other upstream 1003395 26104026 ~ 26107805 (-) True G93795
TU117034 other upstream 1008429 26109060 ~ 26110074 (-) True G93796
TU117337 other upstream 3002668 28103299 ~ 28144589 (-) True AMCG00017906

Expression Profile