RNA id: AMCG00017908


Basic Information

Item Value
RNA id AMCG00017908
length 243
RNA type mRNA
GC content 0.63
exon number 1
gene id AMCG00017908
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28457696 ~ 28457938 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGGGCTGCGCAGTTGTGGCGGAGCTGCTGCTGTCTGGAGGTGCGGACCCTAACGCCCGAGACCCGAGCACGGGGGGCACGGCCCTGCACGACGCGGCACGGGGGGGCTTCCTAGACACAGTGCAGACCCTGGTCCGGTACCGGGCCGACGTCAGCGTCCGAGACAACGATGGAAAACTAGCGGCTGATCTCGCCAGGGAAAATGGATACGTGGACGTGGTTACATTTCTGGAAACATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU117354 lncRNA downstream 32453 28425032 ~ 28425243 (-) True G94074
TU117353 lncRNA downstream 37434 28419916 ~ 28420262 (-) True G94073
TU117336 lncRNA downstream 360538 28093468 ~ 28097158 (-) True G94060
TU117307 lncRNA downstream 617906 27838251 ~ 27839790 (-) True AMCG00017902
TU117425 lncRNA upstream 275886 28733824 ~ 28735744 (-) True G94137
TU117522 lncRNA upstream 749532 29207470 ~ 29207804 (-) True G94218
TU117556 lncRNA upstream 828269 29286207 ~ 29286747 (-) True G94246
TU117670 lncRNA upstream 1454044 29911982 ~ 29914837 (-) True G94337
TU117708 lncRNA upstream 1538311 29996249 ~ 29997513 (-) True G94358
AMCG00017907 mRNA downstream 14408 28434032 ~ 28443288 (-) True AMCG00017907
AMCG00017906 mRNA downstream 337055 28098905 ~ 28120641 (-) False AMCG00017906
AMCG00017903 mRNA downstream 612925 27842212 ~ 27844771 (-) True AMCG00017903
AMCG00017902 mRNA downstream 618015 27838254 ~ 27839681 (-) False AMCG00017902
AMCG00017899 mRNA downstream 733965 27698901 ~ 27723731 (-) True AMCG00017899
AMCG00017909 mRNA upstream 111022 28568960 ~ 28569655 (-) True AMCG00017909
AMCG00017911 mRNA upstream 192003 28649941 ~ 28664695 (-) True AMCG00017911
AMCG00017916 mRNA upstream 236610 28694548 ~ 28698519 (-) True AMCG00017916
AMCG00017917 mRNA upstream 357043 28814981 ~ 28841636 (-) True AMCG00017917
AMCG00017918 mRNA upstream 388440 28846378 ~ 28852152 (-) True AMCG00017918
TU117337 other downstream 313107 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 2347622 26109060 ~ 26110074 (-) True G93796
TU117033 other downstream 2349891 26104026 ~ 26107805 (-) True G93795
TU116981 other downstream 2442204 26012661 ~ 26015492 (-) False AMCG00017866
TU117465 other upstream 416223 28874161 ~ 28875923 (-) True G94172
TU117547 other upstream 811297 29269235 ~ 29273168 (-) True G94238
TU117930 other upstream 2170050 30627988 ~ 30658493 (-) True G94543
TU118224 other upstream 3804838 32262776 ~ 32263531 (-) False AMCG00018000
TU118225 other upstream 3813756 32271694 ~ 32276372 (-) True AMCG00018004

Expression Profile