RNA id: AMCG00017935


Basic Information

Item Value
RNA id AMCG00017935
length 1296
RNA type mRNA
GC content 0.60
exon number 8
gene id AMCG00017935
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29288829 ~ 29304804 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gggggaggaagaggaaggaggaagaTGGAAGGGAATAAAGACGAAGCGGAGAAATGCCTCCTAATAGCGAGGAAAGCCCTGGACGCCGGGGACAAGGAGGCCGCCATGAAGTTCCTGAGGAAAGCGCAGAGACTCTACCCCACCGACAAAGCCCGAGTGCTGCTGGACGGATTGACCCAGAACGGGAGCTCGGCGGGGAACGGGGCGTACCGCAGGAAGCCGGCGGACGGAAGCGATGGGAGCGTGCCCCGGCCCGAGAAGGACGGCCAGGGGATGACTGCAGGTCCCGGAGATACGGCCAAAAGCTTCACTAAAGACCAGGTGGAGGGCGTGCAGAGGATAAAGAAATGCAAGGATTACTACGAGGTGCTGGGCGTCACGAAGGAGGCCAACGAGGAAGAGCTGAAGAAGGCCTACAGGAAGCTGGCTCTGAAGTTCCACCCCGATAAGAACCAGGCTCCTGGGGCCACGGACGCCTTTAAAAAGATCGGCAACGCGTATGCCGTGCTCAGCAACCCGGAGAAGAGGAGGCAGTACGACCTGACAGGCGGGGAGGACCCAGCGGCCGCCGCCCAGCAGGGCCGCTCCGGCTTCGACTTCCACCGGGGCTTCGAGGCAGACATCACTCCAGAGGACCTCTTCAACATGTTCTTCGGGGGAGGCTTCCCTTCCAGTGAGAACCCCCGCTGCCCCTCGTTGAGCCCCCTTTACAAGCAGTTCGTCAGCAGCTCCCCTCTTGAGTCCCTGCACCGATTAAACGATGAAAGCTGCTCGTTAAGACTGAGGCTTAAGGCTTTGTTGGGGGAAATTTCACTCAGGATTTTGGGCAGCGCGCACACCTTCCCTAACGGCCGGGCGCGGTACAGCCCTCAGTACCAGAACCagacacggagagagagggaggaggagaggggcgATGGGGGGTTTTCCATGTTCATTCAGCTGATGCCCATCGTGGTTCTGATCTTGGTGTCCATCCTGAGCCAGCTGATGGTGTCCACTCCTCCATACAGCCTCTACCCCAGGCCGGCCACGGGCCAGACGATCAAACGGCACACCGAGAACCTGCACATCGACTACTACGTGTCCAGGGACTTCAAGTCGGAGTACCGGGGCTCGGCGCTGCAGAAGATCGAGAAGGGCGTGGAAGAGGACTACGTCTCCAACGTCAGGAACAACTGCTGGAAGGAGAGGCAGACGACTTCGCAGAGGAGGAGAAAGTCCAGCCCTGGCCTCGCTGCCCGTCTGGACCGACACCGAACAGAGCAGAAGGTAGAGAAGATAGTTATGGACGAG

Function

GO: NA

KEGG:

id description
K09520 DNAJB14; DnaJ homolog subfamily B member 14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU117556 lncRNA downstream 2082 29286207 ~ 29286747 (-) True G94246
TU117522 lncRNA downstream 81025 29207470 ~ 29207804 (-) True G94218
TU117425 lncRNA downstream 553085 28733824 ~ 28735744 (-) True G94137
TU117354 lncRNA downstream 863586 28425032 ~ 28425243 (-) True G94074
TU117353 lncRNA downstream 868567 28419916 ~ 28420262 (-) True G94073
TU117670 lncRNA upstream 607178 29911982 ~ 29914837 (-) True G94337
TU117708 lncRNA upstream 691445 29996249 ~ 29997513 (-) True G94358
TU117710 lncRNA upstream 693550 29998354 ~ 30002282 (-) False G94359
TU117711 lncRNA upstream 693550 29998354 ~ 30002282 (-) True G94359
TU117712 lncRNA upstream 695069 29999873 ~ 30002282 (-) False G94359
AMCG00017933 mRNA downstream 4998 29274894 ~ 29283831 (-) True AMCG00017933
AMCG00017930 mRNA downstream 15545 29273051 ~ 29273284 (-) True AMCG00017930
AMCG00017929 mRNA downstream 15897 29269281 ~ 29272932 (-) True AMCG00017929
AMCG00017928 mRNA downstream 25296 29258505 ~ 29263533 (-) True AMCG00017928
AMCG00017926 mRNA downstream 171187 29100508 ~ 29117642 (-) True AMCG00017926
AMCG00017932 mRNA upstream 2279 29307083 ~ 29332479 (-) True AMCG00017932
AMCG00017934 mRNA upstream 50235 29355039 ~ 29365548 (-) True AMCG00017934
AMCG00017938 mRNA upstream 220631 29525435 ~ 29527497 (-) True AMCG00017938
AMCG00017937 mRNA upstream 233351 29538155 ~ 29544905 (-) True AMCG00017937
AMCG00017939 mRNA upstream 272305 29577109 ~ 29584432 (-) True AMCG00017939
TU117547 other downstream 15661 29269235 ~ 29273168 (-) True G94238
TU117465 other downstream 412906 28874161 ~ 28875923 (-) True G94172
TU117337 other downstream 1144240 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 3178755 26109060 ~ 26110074 (-) True G93796
TU117033 other downstream 3181024 26104026 ~ 26107805 (-) True G93795
TU117930 other upstream 1323184 30627988 ~ 30658493 (-) True G94543
TU118224 other upstream 2957972 32262776 ~ 32263531 (-) False AMCG00018000
TU118225 other upstream 2966890 32271694 ~ 32276372 (-) True AMCG00018004
TU118217 other upstream 2989216 32294020 ~ 32295433 (-) False AMCG00018007
TU118287 other upstream 3150281 32455085 ~ 32456410 (-) True G94835

Expression Profile