RNA id: AMCG00017956


Basic Information

Item Value
RNA id AMCG00017956
length 6906
RNA type mRNA
GC content 0.47
exon number 22
gene id AMCG00017956
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30177631 ~ 30218286 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTCTCCGTGTGGCATCTCATGACGAGGAGATGCGTGTGTGAGCGCTGCGATGCTGTCGGTGCCGCAGTTCACGTCTCTGAGCCCCGCAGAGCAGTACCAGCACGTCGGCTGCGCACACCGGGTGTTGGGGACAGATGAGGACAATATGGGGGATGCTTGCTCTCAAAAACTGGGATCTGCCAAGCACATCCGCCTCCTGCTGCTCATATTGATTCCCTGCGCTCTCATCTGCTTATTGGTCATCCTTTTGGCATTTGTAGGTATCATTGGAAAAGGCTTCCTGGACACGAATGAGACGGACCTGCTGTCTGCCAGCAACAGTGCCTTCACATCAGACATTCCCTTCACCAAGGCTTTCAACACGGACGCTCTGGGGCCGACTCTGGAAAATGACCCAGGCACCCAGTCCGTGACTCTGACCACCACCGGTGACCAAAAGAGCAAAGGCATGGGTCACTTGATGCCACGCTCTGAAAATGTCCTGACCAGAGCTCCCAATGTGGACGCCAGGATCCACCTCACAGAGAGGGCGGACGGGGCCTGGTCCAGCCAGGCCTCCACAAGCGTGCCCGACTGGATGATTTCACTCTCCACACTAAGTCCTCTCATACAAGTCACCACCCAGGAGGCGGTCACCCTGGTCCCCGACAAGGATTCCTGTATAGACATCAGCGTAAGCCAATGCCAGATTTTACCATATAaccaaaccagccagtcgtcccGGAGCGCCATTGTCAAGAGCATCGAAGTGGAAATGTTCCTCAAGTTCTTCAGCTATCTGAACCGGCTGAGCTGTTACCGGCACATCATGCTTTTCGGCTGCAGCCTCGCCCTCCCTGAATGCGTGGAAGAAGGCGAGGAGAGGCGGCTGATTTTTCCTTGTATGTCGTTCTGTGAGGCAGCGAGGGAGGGCTGTGAGCCGGTCCTTCAGATGTTCAACGCGTCTTGGCCGGACTTCCTCAGGTGCTCTCAGTTTAAGAACGGCACCAGCACAGATGACAACCCCGCTGTCTGCTACAGCCCCAAACACATGAAAGGAAGGTCATCTGTTTGTGGCGGGAAAGACCACTTCCTCTGTGCCACAGGAATCTGTATCCCCAGGAAGCTGTTGTGTAATGGCTACAACGATTGCGACGACTGGAGTGATGAAGCCAACTGCAACTGCAGCGACGGACAGTTCCAGTGCGGCACGGGACGCTGCCTGAGTCCAGGCTTTGTGTGCGATGGCTACGACGACTGCGGGGACCTGAGCGACGAGCGGAACTGCCACTGCGACCCCAACAAGGAGTTCAGATGCGGTGACGGACGGTGTATCAGCAACGACTGGGTGTGCGACGGCGACCACGACTGCGTGGACAAGAGCGATGAAGTGAACTGCTCCTGCAAGAGCCAGGGGCTGATGGAGTGCCGAAATGGGCAATGTGTCCCCAGTGCCTTCCGCTGCGACGGAGAGGACGACTGCAGAGATGGAAGTGACGAGGAGAACTGCAGCCAGCAGCAGAATCAGAATTTGTGTGATCCTGGACATCCAGGCTGCGTATCTACCTCATGCCCGGATGGTTGCGCTGGGAATACGGTTTGTGGCGGCCGTGTCAACAGCACAAACTGTACCCACTGTGAGCCCATTACCCTGGAGCTGTGCATGAACCTGCCCTACAATGTCACCAGATACCCCAACTACCTGGGCCACCAGACCCAGAAGGAGACGTCCATCAGCTGGGAGTCCTCGCTCTTCCCAGCTCTCGTCCAGACAAACTGCTACAAATACCTCATGTTTTTCGCTTGTACGATTCTCGTGCCAAAGTCATTGTGTAAGAACTCCAAGGAGCGCTGTGAATCGGTGCTAGGGATTGTGGGATTGCAGTGGCCAGAGGACACAGACTGCAATCAGTTCCCAGAGGAGGGGCAAGAAAATGCAACTTGCCTGCTGCCGGACCAGGATGTCGATGAGTGCTCCCCAAGCCACTTCAAGTGTAACTCGGGCAGGTGCGTCCTGGCCTCGAAGAGGTGCGACGGCCACCGAGACTGCGATGATGACAGCGACGAGGAAAACTGTGGTTGTAAGGAGCGCGGCCTGTGGGAATGCCCGTCGGACAAAGGCTGCATCAAACACACAATGATCTGTGATGGATTTCCTGACTGCTTGGGCCTGGAGGATGAGCAGAATTGCTCCAAATGCATAGACAACGAGCTCCCGTGCAACAACCACGAGTGTGTGCATCGCACGCTGTGGTGCGACGGGAAGAAGGACTGCTCCGACAGCTCGGACGAGTGGGACTGTGTGTCTCTGTCCAAGACGAATTCCTCCCTGCTGATGGTTCACAAAACAGCCTCCGAGTACCAGGTGTGTGCAGATGACTGGCATCACGAACTGAACCAGCTGGCCTGCAAGCAGATGGGTTTAGGGGAGCCAGCCGTGGTAGACATGGTGCCAGAGCAGCACGGGCAGCACGGGCGCAGGAGGTGGTTACACCTGCACCCCGACTGGAGGCGCAGGAACGGGTCCGCCCTGCAGGGGCTGCTGGAGAAGAGAGGACATAGCTGTCACAGCCGACGAAAGGTGTCTCTTCAGTGTGTTAAAGAAGACTGTGGGCGCCGGCCTGCAGCCCGCATGTCGAAGCGGATCCTGGGCGGCCGGACGAGTCGGCCCGGTCGCTGGCCCTGGCAGTGCTCCCTGCAGAGCGACCCCAGCGGGCACATCTGTGGCTGTGTGCTGATCGGCAGGAAGTGGGTGCTGACGGTGGCGCACTGCTTTGAGGGGCGTGAGGATGCAGATGTGTGGAAAGTAGTGTTTGGCATCAACAACCTGGACCACTCGTCTCCGTTCATGCAGACCAGGAGGGTGACCCGTATCATCGTGCACCCCCGCTACAACAGGGCCGTGGTGGACTATGACATCAGCATCGTGGAGCTGGACAGCGAGGTCAACGTGACGAGCTACGTCCGGCCAGTGTGTTTACCTCACCGGGTCCAGCCCCCTCAGCCGGACACCTACTGCTATATCACTGGCTGGGGGCACATGGGCAACAGAAtgccATTCAAGCTGCAAGAAGGGGAGGTGAGGATCATCTCCATGGATCAATGTCAGTCTTACTTCGATATGAAAACCATCACGTCTCGGATGCTGTGTGCTGGATACGAGTCCGGCACAGTCGATTCCTGCATGGGTGACAGTGGGGGCCCTCTGGTGTGTCAGGAGCCGGACGGACGCTGGAGTTTGTACGGGCTCACATCTTGGGGATCAGTATGTTTTTCCAAAGTCCTGGGACCAGGTGTCTACAGCAACGTGACCCATTTCGTGGACTGGATCGAGAGACAGATATATCTGCACACGTTTTTCCTCAATTAGCACAACTGGCAGGGGACGGTGATTTGACAAGAGGTTAAAATGCTTCAGTGGTTAAAGGAAGGCATAAACAGACGAACGATCTTTGCCTCCTTCAAAGAAACCAAGACAGACTCCTGGAGGAGAGGTAGGATTGTGCCAGTGGAGGAGGGGGCTCCACTGCAGCCTCCCGTTTGGGAAGTTGGGGATTTTTCTGATCATTTTCACTGTGTTTGATGACCATTCCAAGGAGGACCACTCATCAGGCTGTGAGCCTTGTGGACAGGGGTGATTGTCATCCTGTTACTTCTTaatttatattgctttgttcGTATGGACAAACATGTTACCTAACAAATCATAATCGTATATCTTATATACACTTTACAGTACACGGATACGGAAAACCATTTCCTGATGTATACAATTTCCCTTTCTGTAGTAGAGAATAGAAGCTGAATTTGAATCAGGACAGCTGTGCTTTTAACAGAAAGGTTATATAGGACTCATGATCCAGTAGGTAGCATTAAATCATTTGAACTGTACGTTTAAAACACCAGGTCTTGCCCCGGACACGGTCACCGAGATGACCTCTTCATCAGAGGGTCGGAAAGTCACAGACTAGTTTGGAAGAAGAACATATTCTGTAGGATAGAAAGTCCCCGACGATGGGACGGGACAAAGCATATCTTACCTCTAGGGCCAGAATACATTGTGCTAATGTGAATAGCTCCTATTGTAGGTAGGCACACATCAGTAGATACACAGACAGTTCTAGTGAGCTCTGCCATCACGTGGTTATGCTAGCGATTCATGGAGTAGATCTGCTACAAGTGATTTGAGTGTGATTATTGCATTCATTTACCATGCTGCTGTGCCCTGAACTTGTGCAATGGTTTAGAGTTAAGGTCGAACAGATAGATCATgtaataacagcaacaaaacactTAAAGCAAATAGGGATTTCTTCTTGATGCCTGTGACATAAACAGCGAGGTTCAGATTAACTGATCGCACGGACCTCTATTGATGATATGTATCGGGAGTGTGTTGTTCACAGTGAGCGGCGTTGGTTAACAGTGCGTTTGACATCAAGACCACAGGATGTCCCACAATGCTTTATATGTGTACGAGGCCACTTCACAGAACCCCGTTCAGTCTGTCATGGTCAGCTCAGcataactttttaaaaagagacacTCTCATCACACTGAAGGTGGCAAAAGCTGAACTACTGTTCGCCTGGTACTTTCATCTTGTTTGTAAGTCTATAAGCACTTGCAACTTGAATTGCACTTGTATGCTCATTTAAACACTAGAGACCAGCGTCAAAGTGACTTGCTAATAACCAGCCTTTTTATAAACTTATGATAGGCAAGGTTTTACTATTTCGTGCACAAGTGAAGACTGTTATATTATTGCAGGGAAATGGCTGCTGACTGAAACATAAGCCCAAGTGGCTCTGTAATTCAGCACACTGTCGGTGCAAGCTTTCCTTTTATAACGTACAGTACGTCTCTTTTAAAGAAATCTAGCTATCTACAGTATAATACAGCTGATATAAATCTCCAAGTACACTAATCGTTATTAATGTCCAAAACTCTCAACTGAGCCTCATCTTCTCAGTTACAGAAGCTAGACTAGAGAAACCTaaacatattgtaaatatatatacatatataattacaagGAGCACATAGACAATTTATTTCTtagttgtaaaaatgtatagatgGAGTAGTAGCACCAGAAGCTTTTTTTACAAGTGTAAACAATGAAGCTTTCagaacttttacattttattttttattttgtacgtCTGTCCGCTAACCCGCTAGCAATTCACTCTGAATGTTTCTTGTCAAGGAAGATTCACCCAAAAATGAATAGCAAACAGTATCTATTATGTATTCACTTTACAGTTTGTCTCAAAAGAGTTTGTGTTCAAGGCTTATAAGGTGATGTAATGGTAAATGTAAACTGTGGGGACAGTATACTGTTTATACTGGACAGAGTTTCGCTgctattaaaagcaaaaacacaattacactTTATGTACTGAGAGAAATTCGGTCAGTACGTGAATAGGGGGCAACACTGGAACTTGTCATAGCAGTGTAATATAATAATGCAGATGAATATATCAAAACCACAACATTATGAATCGAGAGACAGTGTGATGTCTGTGGCTTACGAGACAATGCCATTGTCGAGTTGAAATACTTGCTCTGTATCTCTGCTTTGTTCAACCTTAACATCGTACTTTTAATGGTTGACAGTTAGACTACATGGGACTCAACCTACACGATGATGACTGTGGATTTGCATTACCAGTAACTGTCAAAGTTAAAGAAAGTATTAAGATTATAATCACATagcttttgtgtctgtgtttgacacatattttttatacaattacaACAAAGCTACATGTATCATATACACCAAGTAACTGAATGACTGATGCCAAAGCCTGTTTTTGTGCATACTCTTTTTGtaggtttttgtttatatggaaaTCTCATACTGTGAGCGATAACTATTGTTGAtgtcagtgactgtgtgtgtctgcgtatGTGTATATAACTCTATATCTATCTGtcttcccctctttctctctctgtatctctatagatatatacatacatttctgctTCAGTGTTTTAATGTAACATTCCATGTAAAGAATtcttgtttgtaatttttttaagtatttttctaCTGCTTTTCTATGTGCACAcatgattatactgtattggCTCacaaacatgactttggtagTTTTACACTTCGTTATGGTTTCAATTATAATTGAAAAACCATAAGAAGAAAGACATGTCACATGTGAAAACAAGTATATTATATGGCACACATACCAAACGTGTCTCTCTCGGACAGGTTTTGGTATGCCTCTAATGTGAAGGACAATTGATTTTGTCAACAATGTGTGTCTCCAAAGCAAATTTAAGTtggacacacaaaaaatatgtttatgaagcaaagaaaaaacatgtaaacaatacaaaataaataaggtaaTTGAGGAAATCTGCCTGTGTCACAGCACTAGTAACCAAGGTGGTGTGATTCTCATGTCACCCTCACTGGGAATATTAGGAATACACTTTTTTATAGCAAGACTCCACTGCCAGACTTTTGAAGCAGTTTTCTTCAGAGCACcctttaaactgtgtttttgaaatatctggaaataaaaataaataattcaatacaattGGTACTACACAAGGTATCGAAGCCTCCCTGGCAATGCTGACACTGTTATTTCAATGAATAGCTGTCTTTGAAACACCACTTTTCTCtcttctgccaagaaataaaataataatattacaagtacagctgttatatttgtaaatactcTTGTTGTAATACATGCACAACATAGCTGGCAAAGATGCTGGATTGAAGACAGTCATCTTTCTTTTTGATCATTCTTCGTGGCTCACACTTTAACCCAGAGGAAAAGGGACATTCTCCATTGAGGTGAGATAAAATGTGTGTGGGAGGTGGTTGTGTGTTGGGGCGTGGGGGGTGTACTCTACAAAAAATCACCAGA

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K09614 CORIN; atrial natriuretic peptide-converting enzyme

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU117684 lncRNA upstream 196989 29978153 ~ 29980642 (+) True G94348
TU117632 lncRNA upstream 526557 29650790 ~ 29651074 (+) True G94310
TU117630 lncRNA upstream 600228 29577156 ~ 29577403 (+) True G94308
TU117571 lncRNA upstream 854286 29322572 ~ 29323345 (+) True G94260
TU117566 lncRNA upstream 866778 29307100 ~ 29310853 (+) True G94255
TU117880 lncRNA downstream 320682 30538968 ~ 30544554 (+) True G94505
TU117900 lncRNA downstream 367424 30585710 ~ 30591176 (+) True G94522
TU117945 lncRNA downstream 499892 30718178 ~ 30722318 (+) True G94555
TU117957 lncRNA downstream 609156 30827442 ~ 30831863 (+) True AMCG00017978
TU117975 lncRNA downstream 1106238 31324524 ~ 31340832 (+) True G94583
AMCG00017952 mRNA upstream 1599 30149343 ~ 30176032 (+) True AMCG00017952
AMCG00017950 mRNA upstream 31540 30142221 ~ 30146091 (+) True AMCG00017950
AMCG00017951 mRNA upstream 70734 30090966 ~ 30106897 (+) True AMCG00017951
AMCG00017953 mRNA upstream 87934 30066677 ~ 30089697 (+) True AMCG00017953
AMCG00017948 mRNA upstream 175312 29990646 ~ 30002319 (+) True AMCG00017948
AMCG00017958 mRNA downstream 72473 30290759 ~ 30291357 (+) True AMCG00017958
AMCG00017957 mRNA downstream 91779 30310065 ~ 30312005 (+) True AMCG00017957
AMCG00017962 mRNA downstream 183303 30401589 ~ 30411488 (+) True AMCG00017962
AMCG00017959 mRNA downstream 197475 30415761 ~ 30429623 (+) True AMCG00017959
AMCG00017961 mRNA downstream 238264 30456550 ~ 30459622 (+) True AMCG00017961
TU117593 other upstream 727284 29433412 ~ 29450347 (+) True G94275
TU117380 other upstream 1533648 28642730 ~ 28643983 (+) False AMCG00017910
TU116638 other upstream 5462010 24705379 ~ 24715621 (+) False AMCG00017829
TU115792 other upstream 9355684 20820511 ~ 20821947 (+) False AMCG00017747
TU115788 other upstream 9362085 20799595 ~ 20815546 (+) False AMCG00017747
TU118260 other downstream 2189143 32407429 ~ 32411373 (+) False AMCG00018012
TU118291 other downstream 2243012 32461298 ~ 32465063 (+) True G94838
TU118319 other downstream 2289404 32507690 ~ 32601449 (+) True G94857

Expression Profile