Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00017962 |
| length | 1041 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 9 |
| gene id | AMCG00017962 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 30401589 ~ 30411488 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0003858 | 3-hydroxybutyrate dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K00019 | E1.1.1.30, bdh; 3-hydroxybutyrate dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU117684 | lncRNA | upstream | 420947 | 29978153 ~ 29980642 (+) | True | G94348 |
| TU117632 | lncRNA | upstream | 750515 | 29650790 ~ 29651074 (+) | True | G94310 |
| TU117630 | lncRNA | upstream | 824186 | 29577156 ~ 29577403 (+) | True | G94308 |
| TU117571 | lncRNA | upstream | 1078244 | 29322572 ~ 29323345 (+) | True | G94260 |
| TU117566 | lncRNA | upstream | 1090736 | 29307100 ~ 29310853 (+) | True | G94255 |
| TU117880 | lncRNA | downstream | 127480 | 30538968 ~ 30544554 (+) | True | G94505 |
| TU117900 | lncRNA | downstream | 174222 | 30585710 ~ 30591176 (+) | True | G94522 |
| TU117945 | lncRNA | downstream | 306690 | 30718178 ~ 30722318 (+) | True | G94555 |
| TU117957 | lncRNA | downstream | 415954 | 30827442 ~ 30831863 (+) | True | AMCG00017978 |
| TU117975 | lncRNA | downstream | 913036 | 31324524 ~ 31340832 (+) | True | G94583 |
| AMCG00017957 | mRNA | upstream | 89584 | 30310065 ~ 30312005 (+) | True | AMCG00017957 |
| AMCG00017958 | mRNA | upstream | 110232 | 30290759 ~ 30291357 (+) | True | AMCG00017958 |
| AMCG00017956 | mRNA | upstream | 183303 | 30177631 ~ 30218286 (+) | True | AMCG00017956 |
| AMCG00017952 | mRNA | upstream | 225557 | 30149343 ~ 30176032 (+) | True | AMCG00017952 |
| AMCG00017950 | mRNA | upstream | 255498 | 30142221 ~ 30146091 (+) | True | AMCG00017950 |
| AMCG00017959 | mRNA | downstream | 4273 | 30415761 ~ 30429623 (+) | True | AMCG00017959 |
| AMCG00017961 | mRNA | downstream | 45062 | 30456550 ~ 30459622 (+) | True | AMCG00017961 |
| AMCG00017960 | mRNA | downstream | 51376 | 30462864 ~ 30487284 (+) | True | AMCG00017960 |
| AMCG00017964 | mRNA | downstream | 109147 | 30520635 ~ 30537464 (+) | True | AMCG00017964 |
| AMCG00017970 | mRNA | downstream | 185508 | 30596996 ~ 30604243 (+) | True | AMCG00017970 |
| TU117593 | other | upstream | 951242 | 29433412 ~ 29450347 (+) | True | G94275 |
| TU117380 | other | upstream | 1757606 | 28642730 ~ 28643983 (+) | False | AMCG00017910 |
| TU116638 | other | upstream | 5685968 | 24705379 ~ 24715621 (+) | False | AMCG00017829 |
| TU115792 | other | upstream | 9579642 | 20820511 ~ 20821947 (+) | False | AMCG00017747 |
| TU115788 | other | upstream | 9586043 | 20799595 ~ 20815546 (+) | False | AMCG00017747 |
| TU118260 | other | downstream | 1995941 | 32407429 ~ 32411373 (+) | False | AMCG00018012 |
| TU118291 | other | downstream | 2049810 | 32461298 ~ 32465063 (+) | True | G94838 |
| TU118319 | other | downstream | 2096202 | 32507690 ~ 32601449 (+) | True | G94857 |
