RNA id: AMCG00017994


Basic Information

Item Value
RNA id AMCG00017994
length 429
RNA type mRNA
GC content 0.67
exon number 2
gene id AMCG00017994
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32164063 ~ 32173862 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCACGTATCGGCATACCTGCGCCCCGTCGCCCCTACAGAGCCCAGCGTATTGCAGCCGCACATCCCATTGAGTCCAGCGTATCGACAGCTTCAAACTCTTCACAGACCCCATGCCAAAGCCCGTGATAATGAAGCAACACTGAGGCCGGTACACTTCGCCCTACAGGGCAGCCTCCGCGCACACCGGGCTCGGCCTCCTGCACTGCCGCTGCTCGCCGCCCGGAGAGGACCGAGCGACGCCGCCAGAGCCGCGCCTGCCCCGGTGAGCCTCTGCGGGCGGCCCTGTCCACACGCACGGCGCGGAGTCGGTCTGTCCGGCCCGCGGGGCCGCAGGTGCGTCGATTGCCGGCAGGATTTCCAGACCGACGCGCTGCTGCAGGGCCACTGCAACGGGCCCGACTCGCCACATCACGTACCACCCGTATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118071 lncRNA downstream 335263 31828459 ~ 31828800 (-) True G94665
TU118061 lncRNA downstream 422404 31741224 ~ 31741659 (-) True G94655
TU118024 lncRNA downstream 541685 31621600 ~ 31622378 (-) True G94622
TU117993 lncRNA downstream 647027 31516832 ~ 31517036 (-) True G94600
TU117991 lncRNA downstream 705809 31457879 ~ 31458254 (-) True G94598
TU118171 lncRNA upstream 18321 32192183 ~ 32196606 (-) True G94747
TU118233 lncRNA upstream 171388 32345250 ~ 32346583 (-) True G94791
TU118408 lncRNA upstream 482168 32656030 ~ 32661641 (-) True AMCG00018020
TU118424 lncRNA upstream 615917 32789779 ~ 32790688 (-) True G94927
TU118438 lncRNA upstream 674404 32848266 ~ 32848466 (-) True G94936
AMCG00017993 mRNA downstream 82 32155771 ~ 32163981 (-) True AMCG00017993
AMCG00017990 mRNA downstream 12387 32143816 ~ 32151676 (-) True AMCG00017990
AMCG00017992 mRNA downstream 23612 32123130 ~ 32140451 (-) True AMCG00017992
AMCG00017991 mRNA downstream 52599 32088147 ~ 32111464 (-) True AMCG00017991
AMCG00017988 mRNA downstream 269257 31892473 ~ 31894806 (-) True AMCG00017988
AMCG00017999 mRNA upstream 25891 32199753 ~ 32210966 (-) True AMCG00017999
AMCG00017998 mRNA upstream 59989 32233851 ~ 32248178 (-) True AMCG00017998
AMCG00018000 mRNA upstream 85845 32259707 ~ 32263865 (-) True AMCG00018000
AMCG00018004 mRNA upstream 97964 32271826 ~ 32274835 (-) False AMCG00018004
AMCG00018007 mRNA upstream 111623 32285485 ~ 32308080 (-) True AMCG00018007
TU117930 other downstream 1505570 30627988 ~ 30658493 (-) True G94543
TU117547 other downstream 2890895 29269235 ~ 29273168 (-) True G94238
TU117465 other downstream 3288140 28874161 ~ 28875923 (-) True G94172
TU117337 other downstream 4019474 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 6053989 26109060 ~ 26110074 (-) True G93796
TU118224 other upstream 88914 32262776 ~ 32263531 (-) False AMCG00018000
TU118225 other upstream 97832 32271694 ~ 32276372 (-) True AMCG00018004
TU118217 other upstream 120158 32294020 ~ 32295433 (-) False AMCG00018007
TU118287 other upstream 281223 32455085 ~ 32456410 (-) True G94835
TU118334 other upstream 429056 32602918 ~ 32605751 (-) False AMCG00018021

Expression Profile