RNA id: AMCG00018000


Basic Information

Item Value
RNA id AMCG00018000
length 483
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00018000
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32259707 ~ 32263865 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGTACAAGGCTGGCAGTTAACCCACAAATTCCTACTGTGGCCCTCAGACTGGCTATTCATACTCTTATCGTCCTCCCATTGTTGTACTTCATCTTCGTGAGGAAGAACCCGTACAAGTTTGCGCTGGGGATGTCCCAGGCGATGGTCACCGCTCTGATGATCTCCTCCAGCTCGGCTACGTTGCCAGTGACCATTCGATGCGCAGAGCAGAACAACAGAATTGACAAGAGGATCACACAGTTCATGTTGCCAATCGGCGCCACCATCAACATGGACGGCTCTGCCCTCTATGAGGCCGTGGCGGCCGTCTTCATTGCACAGCTGGGCAACTATGCGCTGGACATTGGCCAGATCGTGACCATCAGGGTGAAGGTCTCATGGATGGAGAATCACAGTTGGCAGCACCTGCCCGGCCCAACTAATGCCAAACATGGGCCACCACTCGCGGGTGGAACCGCCAGTTTGAAGACAGAGGTCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118171 lncRNA downstream 63101 32192183 ~ 32196606 (-) True G94747
TU118071 lncRNA downstream 430907 31828459 ~ 31828800 (-) True G94665
TU118061 lncRNA downstream 518048 31741224 ~ 31741659 (-) True G94655
TU118024 lncRNA downstream 637329 31621600 ~ 31622378 (-) True G94622
TU117993 lncRNA downstream 742671 31516832 ~ 31517036 (-) True G94600
TU118233 lncRNA upstream 81385 32345250 ~ 32346583 (-) True G94791
TU118408 lncRNA upstream 392165 32656030 ~ 32661641 (-) True AMCG00018020
TU118424 lncRNA upstream 525914 32789779 ~ 32790688 (-) True G94927
TU118438 lncRNA upstream 584401 32848266 ~ 32848466 (-) True G94936
AMCG00017998 mRNA downstream 11529 32233851 ~ 32248178 (-) True AMCG00017998
AMCG00017999 mRNA downstream 48741 32199753 ~ 32210966 (-) True AMCG00017999
AMCG00017994 mRNA downstream 85845 32164063 ~ 32173862 (-) True AMCG00017994
AMCG00017993 mRNA downstream 95726 32155771 ~ 32163981 (-) True AMCG00017993
AMCG00017990 mRNA downstream 108031 32143816 ~ 32151676 (-) True AMCG00017990
AMCG00018004 mRNA upstream 7961 32271826 ~ 32274835 (-) False AMCG00018004
AMCG00018007 mRNA upstream 21620 32285485 ~ 32308080 (-) True AMCG00018007
AMCG00018006 mRNA upstream 83630 32347495 ~ 32360816 (-) True AMCG00018006
AMCG00018009 mRNA upstream 116647 32380512 ~ 32381489 (-) True AMCG00018009
AMCG00018008 mRNA upstream 117685 32381550 ~ 32387686 (-) True AMCG00018008
TU117930 other downstream 1601214 30627988 ~ 30658493 (-) True G94543
TU117547 other downstream 2986539 29269235 ~ 29273168 (-) True G94238
TU117465 other downstream 3383784 28874161 ~ 28875923 (-) True G94172
TU117337 other downstream 4115118 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 6149633 26109060 ~ 26110074 (-) True G93796
TU118225 other upstream 7829 32271694 ~ 32276372 (-) True AMCG00018004
TU118217 other upstream 30155 32294020 ~ 32295433 (-) False AMCG00018007
TU118287 other upstream 191220 32455085 ~ 32456410 (-) True G94835
TU118334 other upstream 339053 32602918 ~ 32605751 (-) False AMCG00018021
TU118371 other upstream 384599 32648464 ~ 32652684 (-) False G94887

Expression Profile