RNA id: AMCG00018025


Basic Information

Item Value
RNA id AMCG00018025
length 630
RNA type mRNA
GC content 0.63
exon number 5
gene id AMCG00018025
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32688381 ~ 32690871 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAAACTTCAGGGAGTCTCAGTGTGAACTTGAGCTTCCCGGCCCGGTCTTTCGGTGGCATCTCTTCAAACGGGCAGACCTGTGTGAAGCAGCGGGGGGGAGCTGCACTGCGCAGTCTGTCTTCAGTGGCAGCGGAGGACCGGCGATTTGCTGGGACCCCGGGATACTTGTCTCCTGAGGTTTTAAGGAAGGATCCGTATGGGAAGCCAGTGGACATGTGGGCCTGTGGGTGTGTGATTGAAGCGCAGCTCCTGGTCGACTCCATGGTCCTTAGGAGAGCCGGTGAAGCGCGGGCCCGGGCCCCTTCCCTGCACTGGGGCCTCGGTGCTGCTCTGGTCTCCAGCTCTGAAGGTCCTCCACTCACCCTGTGTGTCGCTCTGTCCACAGGTGTCATCCTCTACATCCTCCTGGTGGGATACCCCCCCTTCTGGGACGAGGACCAGCACCGGCTGTACCAGCAGATCAAGGCTGGAGCCTACGATTGCCGAGCGCCGCAGGATTCACAGCCAGGGCCGCCAGCTCCagcaacacccccccacccccgatccCTGTCCAGCTCCGGCACAGACGACCCTGGCCGTGGTTTGTGCTCTTGGCAGGCGGGCACCCTGTTCCCCCCCACACTGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118408 lncRNA downstream 26740 32656030 ~ 32661641 (-) True AMCG00018020
TU118233 lncRNA downstream 341798 32345250 ~ 32346583 (-) True G94791
TU118171 lncRNA downstream 491775 32192183 ~ 32196606 (-) True G94747
TU118071 lncRNA downstream 859581 31828459 ~ 31828800 (-) True G94665
TU118061 lncRNA downstream 946722 31741224 ~ 31741659 (-) True G94655
TU118424 lncRNA upstream 98908 32789779 ~ 32790688 (-) True G94927
TU118438 lncRNA upstream 157395 32848266 ~ 32848466 (-) True G94936
AMCG00018023 mRNA downstream 3773 32680587 ~ 32684608 (-) True AMCG00018023
AMCG00018020 mRNA downstream 23266 32658429 ~ 32665115 (-) False AMCG00018020
AMCG00018021 mRNA downstream 82631 32601189 ~ 32605750 (-) True AMCG00018021
AMCG00018016 mRNA downstream 209529 32461594 ~ 32478852 (-) True AMCG00018016
AMCG00018015 mRNA downstream 258816 32425025 ~ 32429565 (-) True AMCG00018015
AMCG00018024 mRNA upstream 4089 32694960 ~ 32713623 (-) True AMCG00018024
AMCG00018022 mRNA upstream 76374 32767245 ~ 32776080 (-) True AMCG00018022
AMCG00018029 mRNA upstream 105013 32795884 ~ 32819447 (-) True AMCG00018029
AMCG00018028 mRNA upstream 145760 32836631 ~ 32847899 (-) True AMCG00018028
AMCG00018032 mRNA upstream 160933 32851804 ~ 32864532 (-) True AMCG00018032
TU118371 other downstream 35697 32648464 ~ 32652684 (-) False G94887
TU118375 other downstream 35697 32648464 ~ 32652684 (-) True G94887
TU118334 other downstream 82630 32602918 ~ 32605751 (-) False AMCG00018021
TU118287 other downstream 231971 32455085 ~ 32456410 (-) True G94835
TU118217 other downstream 392948 32294020 ~ 32295433 (-) False AMCG00018007

Expression Profile