RNA id: AMCG00018029


Basic Information

Item Value
RNA id AMCG00018029
length 2451
RNA type mRNA
GC content 0.59
exon number 19
gene id AMCG00018029
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32795884 ~ 32819447 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGAGCTTCGCTTCTCCCGAGACCCGCAGCATGGAAGCGTGGCTGGACGACCACCTGGACTTCGCCCGCTCCTACTTCGTGCGGAAAGCGACCCGGGAGATGGTCAATGACTGGTTCGCCGAGAGAGTCCACTCCATCCCGGCCTCAAAGGACAGCGGCAGACCGGTGTTGGAGCCGAGCCCCGGGCAACAGGGCGGCCGACCGGACAGCGCCCCGCCCGGCACTCCCACCCGCAAGATCTCCGCCTCGGAGTTCGACCGGCCCCTGCGGCCCATGGTGGTGAAGGACGCCGAGGGCTCCCTGACGTTCCTCAGCGATGCCCAGCGGGAGCCCCTGAGCGCCCAGCACTCACAGGGCGCCGAGGGCCCGGCCGCTGACCAGTGCTCCCGGCTGCTGCAGCTGGTCAGGGACATCTCCAGCCACCTGGACGTACCGGCGCTCTGCCACAGGATCTTCCTGCACATCAACGAGCTGATCGACGCCGACCGCTACTCCCTGTTCCTGGTGTGCGAGGACAGCTCCAACGAGAAGTTCCTGGTCAGCCGGCTGTTTGACCTGGCGGAGGGATCCACGCTGGAGGAGGCCTCGAACAGCCGCATCCGCCTGGAGTGGGGCAAGGGCATCGTGGGGCACGTGGCCTCCACCGGCCGGCCGCTCAACATCAGAAACGCCTACGAGGACCCCCGGTTCAATGCGGAGGTGGACCAGATCACGGGGTACAAGACTCAGAGCATCCTGTGCATGCCCATCAAGAACCACAGGGAGGAGGTTGTTGGTGTTGCTCAAGCAATAAAcaagaaatgtggaaaaaacggCACCTTCACCGAACAAGATGAAAAGGATTTCTCAGCCTACCTGGCGTTCTGCGGGATCGTCCTCCACAACGCGCAGCTGTACGAGACGTCCAGACTGGAGAACCGGAGAAACCAGGTGCTGCTCGACCTGGCCAGCCTGATCTTCGAGGAGCAGCAGAGTCTGGAGGTGCTGCTGAAAAAGATTGCAGCCACGATCCTGTCCTTCATGCAGGCGCAGGCGTGTACCGTGTTCATCGCGGACGGGGAGTCCATGCACTCCTTCTCCAGTGTGTTTCACATGGACCACGAGGAGCTGGGAGAGTCTGCGGACGTCCCGAAGAGCCGGGACTGTGACGTCAGTAAAATCAACTACATGTATGCGCAGTACGTGAAGAACACCCAGGAGCCGCTGAACATCGGGGATGTGGCCAGAGACCGCAGGTTCCCCTGGACAAATGAAAACGCAGAATATGCAAGCGAGCAAATAAAAAGTTTGCTCTGCAGCCCGATTAGAAATGGGAAGAAGGATAAAGTCATAGGGGTTTGCCAGCTGACAAACAAGATGGACGAAGCCACCGGGAAGATCAGAGCCTTCAACAGGAACGACGAGCAGTTCCTGGAGGCCTTTGCGATCTTCTGCGGCCTGGGCATCCAGAACACGCAGATGTACGAGACGGTGGAGCGGGCCATGGCCAAGCAGGAAGTGACTCTGGAGGTGAGCGCAGCAgggatggagggggggggggcaggactGGCCACGGCCGTGCCCTCCGCCCAGTCTCTCCGGCTGCTGGACTTCAGCTTCAGTGACTTCGATCTCTCAGATGCTGAGACCACCCAGGCTGCCATTCGCATGTTCACCGACCTCAACCTGGTGCAGAACTTCCAGATGAAGTACAAGAGCCTGTGCCAGTGGATTCTGAGTGTGAAGAAGAACTACCGGAAGAACGTGGCGTATCACAACTGGAGGCACGCCTTCAACACGGCGCAGTGCATGTTCGCGGTGCTGAAGTCTGGCCGGCTGCAGAGTAATTTAAATGATCTGGAAATCCTGGCCCTGATGATTGCAACGCTGAGCCATGACCTGGATCACAGAGGAGTCAATAACGCCTACATCCAGAGGAGTGATCACCCGCTGGCGCAGCTCTACTGCCACTCCACGATGGAGCACCACCACTTCGACCAGTGCCTCATGATCCTCAACAGCCCAGGTAACCAGATCCTGAGTGGCCTGTCCCTGGAGGAGTACCGGGCCACCCTGAAGATGATCGAGAGGGCTATTCTGGCCACAGACCTGGCTCTCTACATGAAGTCAATGCTGATGACTGCGTGTGACATCTCTGCCATAACCAAGCCCTGGCCCGTGCAGCGCAGGATTGCGGATCTTGTTGCCACTGAGTTCTTCGAGCAAGGAGACAAGGAGAGACGGGAACTCAACGTGGAGCCCATCGACCTGATGAACAGAGAGAAGAGGGACAAGATTCCCAGCATGCAAGTGGCTTTCATCGACGCCATCTGTGTCCAGCTGTACGAGacCCTGGCTGGGATGTCGGAGTCCTGCTCACCCCTGCTGGAGGGATGCAGGAGGAATCGGCAGAACTGGAAACACCTGGCAGAACAAGGTGAGAAAAAGATGGTGAACGGAGCCTCCTAA

Function

GO: NA

KEGG:

id description
K13762 PDE5; cGMP-specific 3',5'-cyclic phosphodiesterase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118424 lncRNA downstream 5196 32789779 ~ 32790688 (-) True G94927
TU118408 lncRNA downstream 134243 32656030 ~ 32661641 (-) True AMCG00018020
TU118233 lncRNA downstream 449301 32345250 ~ 32346583 (-) True G94791
TU118171 lncRNA downstream 599278 32192183 ~ 32196606 (-) True G94747
TU118071 lncRNA downstream 967084 31828459 ~ 31828800 (-) True G94665
TU118438 lncRNA upstream 28819 32848266 ~ 32848466 (-) True G94936
AMCG00018022 mRNA downstream 19804 32767245 ~ 32776080 (-) True AMCG00018022
AMCG00018024 mRNA downstream 82261 32694960 ~ 32713623 (-) True AMCG00018024
AMCG00018025 mRNA downstream 105013 32688381 ~ 32690871 (-) True AMCG00018025
AMCG00018023 mRNA downstream 111276 32680587 ~ 32684608 (-) True AMCG00018023
AMCG00018020 mRNA downstream 130769 32658429 ~ 32665115 (-) False AMCG00018020
AMCG00018028 mRNA upstream 17184 32836631 ~ 32847899 (-) True AMCG00018028
AMCG00018032 mRNA upstream 32357 32851804 ~ 32864532 (-) True AMCG00018032
AMCG00018031 mRNA upstream 47874 32867321 ~ 32889902 (-) True AMCG00018031
TU118371 other downstream 143200 32648464 ~ 32652684 (-) False G94887
TU118375 other downstream 143200 32648464 ~ 32652684 (-) True G94887
TU118334 other downstream 190133 32602918 ~ 32605751 (-) False AMCG00018021
TU118287 other downstream 339474 32455085 ~ 32456410 (-) True G94835
TU118217 other downstream 500451 32294020 ~ 32295433 (-) False AMCG00018007

Expression Profile