RNA id: AMCG00018034


Basic Information

Item Value
RNA id AMCG00018034
length 939
RNA type mRNA
GC content 0.48
exon number 1
gene id AMCG00018034
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32946868 ~ 32947806 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTTTACAGCAACCAAATTCTGACTCTCTGCTGAAGGAGTTTTTTCTGGACATGCAGCCTCTGACTTGCAAGAGGCATCTGCACGTCAGGAGAAAACTACGGCCTGTGCGCTTGCTGGGGCTGGTCTTTGGCCTTTTAGCTATAAGCACGGTCTCATTTTCCTTCAGTGCCTTGGCATGGACCTCTTGGTATAACACTGAGCTGTTCTCCAATGGGGACAGCCTGCAGGCGAGGCCTGTTCCACACAGAACTCTGCTCGGGACAGATGAGCAGCAAGACCTGAATGTCTCCACTGAACCGTCAGCTGCCATGAAAATGCAGGCAAAGGACAATGTGACACTAACTGGCCACCAGGGAGACTACCCAGAAGACCTCTTCTCTCtggaagaaaggaaaagggGTGCTGTTGTTTTACACATGTTTGGGATGCTGTACATGTTCATAGCCTTAGCCATTGTGTGTGATGAGTTCTTTGTACCCTCACTGACTGTAATCACAGAGAAGCTGACGATCTCGGATGATGTGGCGGGCGCAACCTTCATGGCAGCTGGAGGCTCGGCACCAGAGCTCTTCACATCCATCATTGGAGTCTTTGTTTCCCACAGCAATGTTGGCATTGGGACGATTGTTGGGTCGGCAGTATTCAACATCCTTTTTGTCATTGGGATGTGTGCTTTGTTCTCCAAAGAGATTTTGAACCTCACTTGGTGGCCCCTCTTCAGAGATGTGTCTTTCTACATCATTGACTTGATTAtgctgattgtttttttcttggatAACTACATCCAGTACTGGGAAAGTATGCTTCTACTGTCTGCTTATGTGTCCTATGTGATCTTCATGAAGTTCAATGGAACCATGGAGGGGTTTGTGAAAAGCATGATAAACAGGAATAAAGTCGTGGAGGTGCCAGACACCCAAGCAAAGGtaagttaa

Function

GO: NA

KEGG:

id description
K13750 SLC24A2, NCKX2; solute carrier family 24 (sodium/potassium/calcium exchanger), member 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118400 lncRNA upstream 149370 32794755 ~ 32797498 (+) True G94906
TU118399 lncRNA upstream 153727 32789825 ~ 32793141 (+) False AMCG00018027
TU118392 lncRNA upstream 184285 32746824 ~ 32762583 (+) True G94899
TU118325 lncRNA upstream 410968 32517123 ~ 32535900 (+) True G94858
TU118290 lncRNA upstream 480232 32461298 ~ 32466636 (+) False G94838
AMCG00018033 mRNA upstream 32139 32913321 ~ 32914729 (+) True AMCG00018033
AMCG00018026 mRNA upstream 101568 32841023 ~ 32845300 (+) True AMCG00018026
AMCG00018027 mRNA upstream 153264 32789441 ~ 32793604 (+) True AMCG00018027
AMCG00018017 mRNA upstream 294184 32607413 ~ 32652684 (+) True AMCG00018017
AMCG00018018 mRNA upstream 345374 32594172 ~ 32601494 (+) True AMCG00018018
AMCG00018030 mRNA downstream 28125 32975931 ~ 33015403 (+) True AMCG00018030
TU118319 other upstream 345419 32507690 ~ 32601449 (+) True G94857
TU118291 other upstream 481805 32461298 ~ 32465063 (+) True G94838
TU118260 other upstream 535495 32407429 ~ 32411373 (+) False AMCG00018012
TU117593 other upstream 3496521 29433412 ~ 29450347 (+) True G94275
TU117380 other upstream 4302885 28642730 ~ 28643983 (+) False AMCG00017910

Expression Profile