RNA id: TU111984


Basic Information

Item Value
RNA id TU111984
length 264
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G89784
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 42802 ~ 43065 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGAAATTAAGATTCAGATCAGCTTCTCTCCCGCAGTTCTCCAAGCAAATACTAACACAACAATTTCCTGTGCCTTCCTTTGATTCGCCTGATTGCTGCctgatttgtttatatactttaataactcgtttgtaattaaaatgttaatatttttacttaaatagTAGATATCAAATTAACAAATCAAGCGGTGCTTCCTCTtccaaaattgaaatattttgggTTTAATATCCATACCCGGCAGGAGTGCTACTCTAAGGACC

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112023 lncRNA downstream 131985 175050 ~ 176503 (+) True G89818
TU112024 lncRNA downstream 134181 177246 ~ 179935 (+) True G89819
TU112039 lncRNA downstream 184186 227251 ~ 228724 (+) True G89832
TU112047 lncRNA downstream 299550 342615 ~ 402466 (+) True G89837
TU112121 lncRNA downstream 702689 745754 ~ 745999 (+) True G89896
AMCG00017386 mRNA downstream 14655 57720 ~ 98397 (+) False AMCG00017386
AMCG00017385 mRNA downstream 66610 109675 ~ 171747 (+) True AMCG00017385
AMCG00017388 mRNA downstream 166332 209397 ~ 210954 (+) False AMCG00017388
AMCG00017389 mRNA downstream 378444 421509 ~ 440294 (+) True AMCG00017389
AMCG00017390 mRNA downstream 812213 855278 ~ 887994 (+) True AMCG00017390
TU111991 other downstream 4942 48007 ~ 98383 (+) False AMCG00017386
TU111992 other downstream 26833 69898 ~ 98383 (+) False AMCG00017386
TU111993 other downstream 50055 93120 ~ 98383 (+) True AMCG00017386
TU112033 other downstream 164521 207586 ~ 211936 (+) True AMCG00017388
TU112484 other downstream 2644355 2687420 ~ 2695453 (+) True AMCG00017422

Expression Profile