RNA id: TU112008


Basic Information

Item Value
RNA id TU112008
length 201
RNA type TUCP
GC content 0.52
exon number 1
gene id G89804
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 105685 ~ 105885 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGGAAGAGGAGGTCTTGCGAGGGCAGGTAAAGGACTTGGAGGAGAAGCTGGAGACGCTAAAGATGAAGCGCAATGAGGATAAGGCCAAGctgaaggagctggagaagTACAAGATCCAGCTCGAACAGCTGCAGGAGTGGAAGTGCAAGATGCAGGAGCAGCAGACTGACTTACAGAAGCAGCTCAAAGAGGCAAAGAAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112007 lncRNA upstream 60253 166138 ~ 171750 (-) True G89803
TU112074 lncRNA upstream 101701 207586 ~ 218550 (-) False AMCG00017384
TU112076 lncRNA upstream 101701 207586 ~ 219958 (-) False AMCG00017384
TU112090 lncRNA upstream 279786 385671 ~ 447085 (-) True G89870
TU112108 lncRNA upstream 357323 463208 ~ 463423 (-) True G89883
AMCG00017384 mRNA upstream 54169 160054 ~ 276824 (-) True AMCG00017384
AMCG00017387 mRNA upstream 254570 360455 ~ 470430 (-) True AMCG00017387
AMCG00017391 mRNA upstream 829996 935881 ~ 936676 (-) True AMCG00017391
AMCG00017393 mRNA upstream 1169347 1275232 ~ 1289433 (-) True AMCG00017393
AMCG00017394 mRNA upstream 1332643 1438528 ~ 1447581 (-) True AMCG00017394
TU112073 other upstream 140045 245930 ~ 351786 (-) False AMCG00017384
TU112472 other upstream 2502804 2608689 ~ 2615524 (-) False AMCG00017418
TU112697 other upstream 4436890 4542775 ~ 4544760 (-) True G90400
TU112828 other upstream 5052499 5158384 ~ 5221021 (-) False G90501
TU112835 other upstream 5052499 5158384 ~ 5221021 (-) True G90501

Expression Profile