RNA id: TU112644


Basic Information

Item Value
RNA id TU112644
length 219
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G90355
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4348094 ~ 4348312 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGCACAGTGGACTCGCTTGGCTGAAAACGGACCCGCTGGAAACAGGGTCACAGCCCAGTCCTATTGCGTCAAAACAGAGACCGCAAGTCGCAAAGGTTACACCACGACGTGGACTACGTTTAGcgttgcttttctttatttgatcTCCCTATAGGCTGCGATTCAATACCACGACGCCGATTCAGGAGCAGAATTCAGTGCAAATGGCGTGTGCTGTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU112643 lncRNA downstream 803 4346986 ~ 4347291 (-) True G90354
TU112594 lncRNA downstream 145287 4202607 ~ 4202807 (-) True G90307
TU112576 lncRNA downstream 306200 4041687 ~ 4041894 (-) True G90289
TU112574 lncRNA downstream 392958 3954888 ~ 3955136 (-) True G90287
TU112567 lncRNA downstream 662880 3672295 ~ 3685214 (-) True G90281
TU112634 lncRNA upstream 36271 4384583 ~ 4390490 (-) True G90345
TU112709 lncRNA upstream 314524 4662836 ~ 4665167 (-) True G90411
TU112750 lncRNA upstream 581074 4929386 ~ 4937166 (-) True G90443
TU112856 lncRNA upstream 907777 5256089 ~ 5256406 (-) True G90520
TU112880 lncRNA upstream 1006950 5355262 ~ 5356316 (-) True G90540
AMCG00017433 mRNA downstream 48315 4281484 ~ 4299779 (-) True AMCG00017433
AMCG00017435 mRNA downstream 78008 4242448 ~ 4270086 (-) True AMCG00017435
AMCG00017436 mRNA downstream 143833 4203686 ~ 4204261 (-) True AMCG00017436
AMCG00017438 mRNA downstream 438882 3908513 ~ 3909212 (-) True AMCG00017438
AMCG00017437 mRNA downstream 439606 3907452 ~ 3908488 (-) True AMCG00017437
AMCG00017442 mRNA upstream 62570 4410882 ~ 4439595 (-) True AMCG00017442
AMCG00017444 mRNA upstream 112207 4460519 ~ 4461277 (-) True AMCG00017444
AMCG00017440 mRNA upstream 162107 4510419 ~ 4512209 (-) True AMCG00017440
AMCG00017441 mRNA upstream 189659 4537971 ~ 4550882 (-) True AMCG00017441
AMCG00017443 mRNA upstream 210593 4558905 ~ 4584957 (-) True AMCG00017443
TU112472 other downstream 1732570 2608689 ~ 2615524 (-) False AMCG00017418
TU112073 other downstream 3996308 245930 ~ 351786 (-) False AMCG00017384
TU112008 other downstream 4242209 105685 ~ 105885 (-) True G89804
TU112697 other upstream 194463 4542775 ~ 4544760 (-) True G90400
TU112828 other upstream 810072 5158384 ~ 5221021 (-) False G90501
TU112835 other upstream 810072 5158384 ~ 5221021 (-) True G90501
TU112836 other upstream 874161 5222473 ~ 5223047 (-) True G90502
TU113104 other upstream 2038940 6387252 ~ 6389038 (-) True G90715

Expression Profile