RNA id: TU113243



Basic Information


Item Value
RNA id TU113243
length 300
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G90759
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 6883642 ~ 6883968 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaacatcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttcccttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113235 lncRNA downstream 6674 6760655 ~ 6876968 (-) True G90751
TU113113 lncRNA downstream 189536 6693733 ~ 6694106 (-) True G90724
TU113107 lncRNA downstream 486751 6396628 ~ 6396891 (-) True G90718
TU113106 lncRNA downstream 487777 6395648 ~ 6395865 (-) True G90717
TU113105 lncRNA downstream 492413 6390885 ~ 6391229 (-) True G90716
TU113214 lncRNA upstream 3532 6887500 ~ 7184824 (-) False G90746
TU113219 lncRNA upstream 24418 6908386 ~ 7184824 (-) False G90746
TU113201 lncRNA upstream 90692 6974660 ~ 7188648 (-) True G90746
TU113217 lncRNA upstream 146805 7030773 ~ 7184824 (-) False G90746
TU113209 lncRNA upstream 169246 7053214 ~ 7184824 (-) False G90746
AMCG00017481 mRNA downstream 109844 6772822 ~ 6773798 (-) True AMCG00017481
AMCG00017482 mRNA downstream 162249 6718436 ~ 6721393 (-) True AMCG00017482
AMCG00017476 mRNA downstream 672640 6181726 ~ 6211002 (-) True AMCG00017476
AMCG00017472 mRNA downstream 1075151 5790848 ~ 5808491 (-) True AMCG00017472
AMCG00017473 mRNA downstream 1116499 5764570 ~ 5767143 (-) True AMCG00017473
AMCG00017485 mRNA upstream 92969 6976937 ~ 6981260 (-) True AMCG00017485
AMCG00017487 mRNA upstream 326390 7210358 ~ 7221745 (-) True AMCG00017487
AMCG00017489 mRNA upstream 408888 7292856 ~ 7299945 (-) True AMCG00017489
AMCG00017490 mRNA upstream 567674 7451642 ~ 7453573 (-) True AMCG00017490
AMCG00017492 mRNA upstream 605114 7489082 ~ 7491787 (-) True AMCG00017492
TU113104 other downstream 494604 6387252 ~ 6389038 (-) True G90715
TU112836 other downstream 1660595 5222473 ~ 5223047 (-) True G90502
TU112828 other downstream 1662621 5158384 ~ 5221021 (-) False G90501
TU112835 other downstream 1662621 5158384 ~ 5221021 (-) True G90501
TU112697 other downstream 2338882 4542775 ~ 4544760 (-) True G90400
TU113210 other upstream 4754 6888722 ~ 6914790 (-) False G90746
TU113233 other upstream 228468 7112436 ~ 7113181 (-) True G90749
TU113453 other upstream 946917 7830885 ~ 7832592 (-) True G90937
TU113456 other upstream 1108169 7992137 ~ 7996595 (-) True G90939
TU113572 other upstream 1612527 8496495 ~ 8514955 (-) True AMCG00017520

Expression Profile