RNA id: TU113310



Basic Information


Item Value
RNA id TU113310
length 378
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G90817
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7323730 ~ 7324107 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtggaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataactcttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaattatagactgatcatttctttgtcagtgggcaaacatacaaaatcagcaggggatcaaatactttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113297 lncRNA downstream 41253 7266067 ~ 7282477 (-) True G90805
TU113285 lncRNA downstream 96887 7221828 ~ 7226843 (-) True G90796
TU113271 lncRNA downstream 117869 7205620 ~ 7205861 (-) True G90783
TU113217 lncRNA downstream 138906 7030773 ~ 7184824 (-) False G90746
TU113391 lncRNA upstream 344073 7668180 ~ 7670591 (-) False AMCG00017497
TU113392 lncRNA upstream 369476 7693583 ~ 7694005 (-) True G90885
TU113416 lncRNA upstream 449111 7773218 ~ 7784195 (-) True G90908
TU113454 lncRNA upstream 504391 7828498 ~ 7830609 (-) True G90938
TU113465 lncRNA upstream 690288 8014395 ~ 8023105 (-) True G90948
AMCG00017489 mRNA downstream 23785 7292856 ~ 7299945 (-) True AMCG00017489
AMCG00017487 mRNA downstream 101985 7210358 ~ 7221745 (-) True AMCG00017487
AMCG00017485 mRNA downstream 342470 6976937 ~ 6981260 (-) True AMCG00017485
AMCG00017481 mRNA downstream 549932 6772822 ~ 6773798 (-) True AMCG00017481
AMCG00017482 mRNA downstream 602337 6718436 ~ 6721393 (-) True AMCG00017482
AMCG00017490 mRNA upstream 127535 7451642 ~ 7453573 (-) True AMCG00017490
AMCG00017492 mRNA upstream 164975 7489082 ~ 7491787 (-) True AMCG00017492
AMCG00017499 mRNA upstream 263844 7587951 ~ 7594082 (-) True AMCG00017499
AMCG00017500 mRNA upstream 301464 7625571 ~ 7639260 (-) True AMCG00017500
AMCG00017498 mRNA upstream 323539 7647646 ~ 7650108 (-) True AMCG00017498
TU113233 other downstream 210549 7112436 ~ 7113181 (-) True G90749
TU113210 other downstream 408940 6888722 ~ 6914790 (-) False G90746
TU113104 other downstream 934692 6387252 ~ 6389038 (-) True G90715
TU112836 other downstream 2100683 5222473 ~ 5223047 (-) True G90502
TU112835 other downstream 2102709 5158384 ~ 5221021 (-) True G90501
TU113453 other upstream 506778 7830885 ~ 7832592 (-) True G90937
TU113456 other upstream 668030 7992137 ~ 7996595 (-) True G90939
TU113572 other upstream 1172388 8496495 ~ 8514955 (-) True AMCG00017520
TU113686 other upstream 1431181 8755288 ~ 8755907 (-) True G91119
TU113928 other upstream 3037193 10361300 ~ 10497104 (-) True AMCG00017556

Expression Profile