RNA id: TU113413



Basic Information


Item Value
RNA id TU113413
length 200
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G90905
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7790459 ~ 7790658 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCAGCGTGCCCTGGAAGATGTCATGCACCCAGGTGGGCTCGACCACGTTCTCCTCGGCTTCGCTGTTGCTGCTCCCGTTCTTCAGCCTCCCGTTCTGCTTCTCCTGCTTCTTCTCCTCCTGCAGGATGTCCGCCACAGTGTTCAGGAGGTAGTTGAGGAACTCGTGGGCATCCTGTTGCATGTAGTTGTCAAAAAGATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113386 lncRNA upstream 111994 7677899 ~ 7678465 (+) True G90879
TU113385 lncRNA upstream 118086 7672143 ~ 7672373 (+) True G90878
TU113357 lncRNA upstream 164007 7624692 ~ 7626452 (+) True G90857
TU113150 lncRNA upstream 601816 7010723 ~ 7188643 (+) False AMCG00017486
TU113414 lncRNA downstream 15720 7806378 ~ 7809418 (+) False AMCG00017508
TU113429 lncRNA downstream 60510 7851168 ~ 7851374 (+) True G90915
TU113431 lncRNA downstream 131534 7922192 ~ 7922640 (+) True G90917
TU113433 lncRNA downstream 172385 7963043 ~ 7963276 (+) True G90919
TU113435 lncRNA downstream 175662 7966320 ~ 7966608 (+) True G90921
AMCG00017503 mRNA upstream 78265 7702114 ~ 7712194 (+) True AMCG00017503
AMCG00017495 mRNA upstream 123384 7663708 ~ 7667075 (+) True AMCG00017495
AMCG00017493 mRNA upstream 132334 7655383 ~ 7658125 (+) True AMCG00017493
AMCG00017496 mRNA upstream 143199 7642275 ~ 7647260 (+) True AMCG00017496
AMCG00017494 mRNA upstream 184260 7605288 ~ 7606199 (+) True AMCG00017494
AMCG00017508 mRNA downstream 15730 7806388 ~ 7813639 (+) True AMCG00017508
AMCG00017510 mRNA downstream 40340 7830998 ~ 7835213 (+) True AMCG00017510
AMCG00017509 mRNA downstream 201457 7992115 ~ 8023128 (+) True AMCG00017509
AMCG00017511 mRNA downstream 385072 8175730 ~ 8177002 (+) True AMCG00017511
AMCG00017514 mRNA downstream 401129 8191787 ~ 8212616 (+) True AMCG00017514
TU113388 other upstream 97112 7692585 ~ 7693347 (+) True G90881
TU113384 other upstream 118609 7668183 ~ 7671850 (+) True G90877
TU113173 other upstream 605669 6804744 ~ 7184790 (+) False AMCG00017486
TU113473 other downstream 341710 8132368 ~ 8132854 (+) True G90955
TU113646 other downstream 897039 8687697 ~ 8689406 (+) False AMCG00017526
TU113671 other downstream 961055 8751713 ~ 8753781 (+) False AMCG00017527
TU113887 other downstream 1729115 9519773 ~ 9583280 (+) True G91281
TU114078 other downstream 4088956 11879614 ~ 11880499 (+) True G91452

Expression Profile