RNA id: TU113485



Basic Information


Item Value
RNA id TU113485
length 252
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G90965
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 8164654 ~ 8164905 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaataagatctggtgcaaccaattaccttcagaagtcacataataagttaaataaaggccacctgtgtgcaatctaagtgtcacatgatctcggtatatatacagtgcatctggaaagtattcacagcgcttcactttttccacattttgttatgttacagccttattccaaaatggattaaattcattattttcctcaaaattctacaaacaataccccataataacaatgtgaaagaagtttgtttgaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113484 lncRNA downstream 2541 8161535 ~ 8162113 (-) True G90964
TU113474 lncRNA downstream 31800 8132395 ~ 8132854 (-) True G90956
TU113465 lncRNA downstream 141549 8014395 ~ 8023105 (-) True G90948
TU113454 lncRNA downstream 334045 7828498 ~ 7830609 (-) True G90938
TU113416 lncRNA downstream 380459 7773218 ~ 7784195 (-) True G90908
TU113512 lncRNA upstream 64410 8229315 ~ 8229561 (-) True G90992
TU113525 lncRNA upstream 121984 8286889 ~ 8287117 (-) True G91005
TU113539 lncRNA upstream 124860 8289765 ~ 8381670 (-) True G91016
TU113611 lncRNA upstream 438716 8603621 ~ 8605626 (-) True G91064
TU113678 lncRNA upstream 567855 8732760 ~ 8735232 (-) False AMCG00017531
AMCG00017512 mRNA downstream 3210 8142440 ~ 8161444 (-) True AMCG00017512
AMCG00017513 mRNA downstream 122200 8023656 ~ 8042454 (-) True AMCG00017513
AMCG00017506 mRNA downstream 173214 7989793 ~ 7991440 (-) True AMCG00017506
AMCG00017507 mRNA downstream 313433 7843646 ~ 7851221 (-) True AMCG00017507
AMCG00017505 mRNA downstream 371055 7781052 ~ 7793599 (-) True AMCG00017505
AMCG00017516 mRNA upstream 164242 8329147 ~ 8349988 (-) True AMCG00017516
AMCG00017519 mRNA upstream 222157 8387062 ~ 8416479 (-) True AMCG00017519
AMCG00017520 mRNA upstream 308585 8473490 ~ 8514803 (-) False AMCG00017520
AMCG00017524 mRNA upstream 442154 8607059 ~ 8627186 (-) True AMCG00017524
AMCG00017529 mRNA upstream 498745 8663650 ~ 8677813 (-) True AMCG00017529
TU113456 other downstream 168059 7992137 ~ 7996595 (-) True G90939
TU113453 other downstream 332062 7830885 ~ 7832592 (-) True G90937
TU113233 other downstream 1051473 7112436 ~ 7113181 (-) True G90749
TU113210 other downstream 1249864 6888722 ~ 6914790 (-) False G90746
TU113104 other downstream 1775616 6387252 ~ 6389038 (-) True G90715
TU113572 other upstream 331590 8496495 ~ 8514955 (-) True AMCG00017520
TU113686 other upstream 590383 8755288 ~ 8755907 (-) True G91119
TU113928 other upstream 2196395 10361300 ~ 10497104 (-) True AMCG00017556
TU114641 other upstream 6268253 14433158 ~ 14479787 (-) True AMCG00017631
TU114907 other upstream 7702042 15866947 ~ 15867647 (-) True G92124

Expression Profile