RNA id: TU113963



Basic Information


Item Value
RNA id TU113963
length 321
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G91355
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 11151378 ~ 11151698 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tctcttcattcttgtctcaattttcctcttgcggccacgtccagggatgttggctacagtcccatgggccttaaatttcttaataatcttggcaacagtgctcacaggaacatcaagctctttagagatggtcttgtaggaccatgcttggctattaccttctttctaacctcctcagacaacgctctggttttccttctcttttccatgttcagtgtgatacacacagtgacacaaagcagcagagtgagtacttttctccatttaaactggctgaatgagtgataaagcgattgaagacacctgtgatactaatGAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113962 lncRNA downstream 83363 11067713 ~ 11068015 (-) True G91354
TU113927 lncRNA downstream 790230 10357400 ~ 10361148 (-) True G91321
TU113917 lncRNA downstream 853570 10297405 ~ 10297808 (-) True G91311
TU113907 lncRNA downstream 1471157 9677471 ~ 9680221 (-) True G91301
TU113906 lncRNA downstream 1475599 9675546 ~ 9675779 (-) True G91300
TU113967 lncRNA upstream 116408 11268106 ~ 11268595 (-) True G91359
TU113970 lncRNA upstream 136157 11287855 ~ 11288163 (-) True G91362
TU113985 lncRNA upstream 138630 11290328 ~ 11291234 (-) True G91371
TU113996 lncRNA upstream 245822 11397520 ~ 11397731 (-) True G91381
TU114018 lncRNA upstream 352596 11504294 ~ 11506805 (-) False AMCG00017563
AMCG00017558 mRNA downstream 201669 10948110 ~ 10949709 (-) True AMCG00017558
AMCG00017559 mRNA downstream 203373 10947746 ~ 10948005 (-) True AMCG00017559
AMCG00017555 mRNA downstream 655228 10487297 ~ 10496150 (-) True AMCG00017555
AMCG00017556 mRNA downstream 789111 10361971 ~ 10362267 (-) False AMCG00017556
AMCG00017554 mRNA downstream 1604064 9495728 ~ 9547314 (-) True AMCG00017554
AMCG00017557 mRNA upstream 141910 11293608 ~ 11315800 (-) True AMCG00017557
AMCG00017572 mRNA upstream 205107 11356805 ~ 11387412 (-) True AMCG00017572
AMCG00017566 mRNA upstream 262630 11414328 ~ 11423945 (-) True AMCG00017566
AMCG00017563 mRNA upstream 352326 11504024 ~ 11506820 (-) True AMCG00017563
AMCG00017571 mRNA upstream 379412 11531110 ~ 11536385 (-) True AMCG00017571
TU113928 other downstream 654274 10361300 ~ 10497104 (-) True AMCG00017556
TU113686 other downstream 2395471 8755288 ~ 8755907 (-) True G91119
TU113572 other downstream 2636423 8496495 ~ 8514955 (-) True AMCG00017520
TU113456 other downstream 3154783 7992137 ~ 7996595 (-) True G90939
TU113453 other downstream 3318786 7830885 ~ 7832592 (-) True G90937
TU114641 other upstream 3281460 14433158 ~ 14479787 (-) True AMCG00017631
TU114907 other upstream 4715249 15866947 ~ 15867647 (-) True G92124
TU114913 other upstream 4878704 16030402 ~ 16030905 (-) True G92129
TU114912 other upstream 4878758 16030456 ~ 16030905 (-) False G92129
TU115048 other upstream 6316907 17468605 ~ 17474339 (-) False AMCG00017665

Expression Profile