RNA id: TU114194



Basic Information


Item Value
RNA id TU114194
length 241
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G91545
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 12435744 ~ 12435984 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agtcttccatgaaggccacttctgaccagacttctccggacagtagatgtgTGTaacagggtcccactgttttctgccaattctgagctgatggcactgctggataTCTTCCGATTGGggagggaagtaagcatgatgtgtctttcatctgctgcagtgagtttccttggccgaccactgcgtctaccgtcctcaacgttgcccgtttctttgtgcttcttcaaaagagcttggacagcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114123 lncRNA upstream 460132 11975409 ~ 11975612 (+) True G91490
TU114113 lncRNA upstream 499405 11936101 ~ 11936339 (+) True G91481
TU114112 lncRNA upstream 499783 11935627 ~ 11935961 (+) True G91480
TU114003 lncRNA upstream 1019004 11416521 ~ 11416740 (+) True G91387
TU114001 lncRNA upstream 1020642 11408688 ~ 11415102 (+) True G91386
TU114199 lncRNA downstream 54099 12490083 ~ 12490296 (+) True G91549
TU114261 lncRNA downstream 271326 12707310 ~ 12710716 (+) True G91597
TU114286 lncRNA downstream 429203 12865187 ~ 12891356 (+) False G91619
TU114285 lncRNA downstream 453656 12889640 ~ 12891356 (+) True G91619
TU114318 lncRNA downstream 623872 13059856 ~ 13060646 (+) True G91649
AMCG00017585 mRNA upstream 37991 12393280 ~ 12397753 (+) True AMCG00017585
AMCG00017580 mRNA upstream 257626 12173844 ~ 12178118 (+) True AMCG00017580
AMCG00017581 mRNA upstream 277503 12148269 ~ 12158241 (+) True AMCG00017581
AMCG00017576 mRNA upstream 304794 12129663 ~ 12130950 (+) True AMCG00017576
AMCG00017575 mRNA upstream 317678 12098990 ~ 12118066 (+) True AMCG00017575
AMCG00017583 mRNA downstream 36964 12472948 ~ 12489169 (+) True AMCG00017583
AMCG00017584 mRNA downstream 70606 12506590 ~ 12521063 (+) True AMCG00017584
AMCG00017586 mRNA downstream 110385 12546369 ~ 12565088 (+) True AMCG00017586
AMCG00017592 mRNA downstream 276173 12712157 ~ 12717400 (+) True AMCG00017592
AMCG00017593 mRNA downstream 285257 12721241 ~ 12727616 (+) True AMCG00017593
TU114078 other upstream 555245 11879614 ~ 11880499 (+) True G91452
TU113887 other upstream 2852464 9519773 ~ 9583280 (+) True G91281
TU113671 other upstream 3681963 8751713 ~ 8753781 (+) False AMCG00017527
TU113646 other upstream 3746338 8687697 ~ 8689406 (+) False AMCG00017526
TU113473 other upstream 4302890 8132368 ~ 8132854 (+) True G90955
TU114568 other downstream 1600892 14036876 ~ 14039063 (+) False AMCG00017620
TU114814 other downstream 2641341 15077325 ~ 15084278 (+) True G92046
TU114828 other downstream 2676626 15112610 ~ 15116031 (+) False AMCG00017650
TU114906 other downstream 3431047 15867031 ~ 15867634 (+) True G92123
TU114914 other downstream 3699041 16135025 ~ 16135316 (+) True G92130

Expression Profile