RNA id: TU114237



Basic Information


Item Value
RNA id TU114237
length 265
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G91576
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 12656069 ~ 12656333 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atatacactcacctaaaggattattaggaacacctgttcattttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaaagtctgaatgggaaagaaagctgatttaagcaattttgagcgtggcatggttgttggggCCAGACGggctgctcagttactgggattttcacgcacaaccatttctaggctTTACAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU114221 lncRNA downstream 134855 12517080 ~ 12521214 (-) True G91562
TU114220 lncRNA downstream 134855 12520137 ~ 12521214 (-) False G91562
TU114209 lncRNA downstream 146926 12506627 ~ 12509143 (-) True G91556
TU114204 lncRNA downstream 156122 12496291 ~ 12499947 (-) True G91553
TU114187 lncRNA downstream 314334 12341442 ~ 12341735 (-) True G91539
TU114571 lncRNA upstream 1387788 14044121 ~ 14044527 (-) True G91850
TU114757 lncRNA upstream 2103748 14760081 ~ 14764819 (-) False AMCG00017638
TU114762 lncRNA upstream 2143757 14800090 ~ 14800401 (-) True G92006
TU114785 lncRNA upstream 2268060 14924393 ~ 14925960 (-) True G92024
TU114818 lncRNA upstream 2398130 15054463 ~ 15054684 (-) True G92049
AMCG00017582 mRNA downstream 333699 12307781 ~ 12322370 (-) True AMCG00017582
AMCG00017579 mRNA downstream 558800 12092470 ~ 12097269 (-) True AMCG00017579
AMCG00017565 mRNA downstream 682385 11955414 ~ 11973684 (-) True AMCG00017565
AMCG00017568 mRNA downstream 717536 11933251 ~ 11938533 (-) True AMCG00017568
AMCG00017567 mRNA downstream 748675 11904838 ~ 11907394 (-) True AMCG00017567
AMCG00017587 mRNA upstream 8198 12664531 ~ 12665835 (-) True AMCG00017587
AMCG00017589 mRNA upstream 14775 12671108 ~ 12677683 (-) True AMCG00017589
AMCG00017591 mRNA upstream 26093 12682426 ~ 12688515 (-) True AMCG00017591
AMCG00017588 mRNA upstream 48125 12704458 ~ 12710164 (-) True AMCG00017588
AMCG00017590 mRNA upstream 73698 12730031 ~ 12739099 (-) True AMCG00017590
TU113928 other downstream 2158965 10361300 ~ 10497104 (-) True AMCG00017556
TU113686 other downstream 3900162 8755288 ~ 8755907 (-) True G91119
TU113572 other downstream 4141114 8496495 ~ 8514955 (-) True AMCG00017520
TU113456 other downstream 4659474 7992137 ~ 7996595 (-) True G90939
TU113453 other downstream 4823477 7830885 ~ 7832592 (-) True G90937
TU114641 other upstream 1776825 14433158 ~ 14479787 (-) True AMCG00017631
TU114907 other upstream 3210614 15866947 ~ 15867647 (-) True G92124
TU114913 other upstream 3374069 16030402 ~ 16030905 (-) True G92129
TU114912 other upstream 3374123 16030456 ~ 16030905 (-) False G92129
TU115048 other upstream 4812272 17468605 ~ 17474339 (-) False AMCG00017665

Expression Profile


TU114237 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
End of interactive chart.

TU114237 Expression in each Bioproject

Bar chart with 4 bars.
TU114237 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.