RNA id: TU114422



Basic Information


Item Value
RNA id TU114422
length 328
lncRNA type inter_gene
GC content 0.45
exon number 3
gene id G91727
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 13528781 ~ 13533210 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTAGAGAAGAACTGAGTCTCTGAGTTGAGCTCCAGACCTGCAGCAGGAAAGATGAGCTCTCGTCACCACATTATTGCAGCTCTCCTCCTGGCTGCCCTGTGCTCCTCTGCTCTTGGCCAAAAGAAATACTGTattaaaggaaattataatcAATCCCATGGAGGCCTGGCAATTACAGTAAATTCCTGGAATCACAGAGTCACATCCAAAGAGTTTCCAGGATCCCCTTTAGATATTGACCCAGACCAGAAGAGGACCACGATGAAGGAACAGACACTTATTACTTTTACCAAGACCACAAGACCAGCATTAACATTTCAATCAGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114421 lncRNA upstream 2632 13522641 ~ 13526149 (+) True G91726
TU114374 lncRNA upstream 269209 13196895 ~ 13259572 (+) False AMCG00017600
TU114376 lncRNA upstream 282128 13243577 ~ 13246653 (+) False AMCG00017600
TU114365 lncRNA upstream 387903 13140662 ~ 13140878 (+) True G91683
TU114318 lncRNA upstream 468135 13059856 ~ 13060646 (+) True G91649
TU114429 lncRNA downstream 293314 13826524 ~ 13830813 (+) False AMCG00017615
TU114438 lncRNA downstream 325007 13858217 ~ 13913757 (+) True G91740
TU114570 lncRNA downstream 510874 14044084 ~ 14044528 (+) True G91849
TU114661 lncRNA downstream 985022 14518232 ~ 14539104 (+) True G91931
TU114761 lncRNA downstream 1266881 14800091 ~ 14800376 (+) True G92005
AMCG00017613 mRNA upstream 10614 13501947 ~ 13518167 (+) True AMCG00017613
AMCG00017611 mRNA upstream 53970 13446501 ~ 13474811 (+) True AMCG00017611
AMCG00017609 mRNA upstream 99607 13428148 ~ 13429174 (+) True AMCG00017609
AMCG00017608 mRNA upstream 106335 13419796 ~ 13422446 (+) True AMCG00017608
AMCG00017610 mRNA upstream 145330 13371615 ~ 13383451 (+) True AMCG00017610
AMCG00017612 mRNA downstream 9251 13542461 ~ 13548563 (+) True AMCG00017612
AMCG00017615 mRNA downstream 248056 13781266 ~ 13830819 (+) True AMCG00017615
AMCG00017619 mRNA downstream 460381 13993591 ~ 14009256 (+) True AMCG00017619
AMCG00017620 mRNA downstream 492426 14025636 ~ 14038327 (+) True AMCG00017620
AMCG00017618 mRNA downstream 535564 14068774 ~ 14084436 (+) True AMCG00017618
TU114078 other upstream 1648282 11879614 ~ 11880499 (+) True G91452
TU113887 other upstream 3945501 9519773 ~ 9583280 (+) True G91281
TU113671 other upstream 4775000 8751713 ~ 8753781 (+) False AMCG00017527
TU113646 other upstream 4839375 8687697 ~ 8689406 (+) False AMCG00017526
TU113473 other upstream 5395927 8132368 ~ 8132854 (+) True G90955
TU114568 other downstream 503666 14036876 ~ 14039063 (+) False AMCG00017620
TU114814 other downstream 1544115 15077325 ~ 15084278 (+) True G92046
TU114828 other downstream 1579400 15112610 ~ 15116031 (+) False AMCG00017650
TU114906 other downstream 2333821 15867031 ~ 15867634 (+) True G92123
TU114914 other downstream 2601815 16135025 ~ 16135316 (+) True G92130

Expression Profile