RNA id: TU114661



Basic Information


Item Value
RNA id TU114661
length 226
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G91931
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14518232 ~ 14539104 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGTCTCCCACTATATTCTTGCGGGCACATGCAGTGGTAGGATTTCAAATGAGGGACGTTGGTACAAAGGCCATTATTGTGGCATGGGTTCTCCTTGCACGAGTCTATGATGATTAAATCACAAGATGAGCTTTATAACTGAGGGCAGCAGTGGGTCCATTCATGGATAGCAACAGCAGGAACATGCAAGagccactccttctcatccctggcccctaagtggtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114570 lncRNA upstream 473704 14044084 ~ 14044528 (+) True G91849
TU114438 lncRNA upstream 604475 13858217 ~ 13913757 (+) True G91740
TU114429 lncRNA upstream 687419 13826524 ~ 13830813 (+) False AMCG00017615
TU114422 lncRNA upstream 985022 13528781 ~ 13533210 (+) True G91727
TU114421 lncRNA upstream 992083 13522641 ~ 13526149 (+) True G91726
TU114761 lncRNA downstream 260987 14800091 ~ 14800376 (+) True G92005
TU114777 lncRNA downstream 404279 14943383 ~ 15036381 (+) True G92016
TU114805 lncRNA downstream 523193 15062297 ~ 15085398 (+) True G92038
TU114807 lncRNA downstream 527033 15066137 ~ 15067818 (+) True G92039
TU114822 lncRNA downstream 549028 15088132 ~ 15090475 (+) False AMCG00017651
AMCG00017628 mRNA upstream 44872 14467590 ~ 14473360 (+) True AMCG00017628
AMCG00017621 mRNA upstream 366453 14135600 ~ 14151779 (+) True AMCG00017621
AMCG00017626 mRNA upstream 385769 14129633 ~ 14132463 (+) True AMCG00017626
AMCG00017618 mRNA upstream 433796 14068774 ~ 14084436 (+) True AMCG00017618
AMCG00017620 mRNA upstream 479905 14025636 ~ 14038327 (+) True AMCG00017620
AMCG00017637 mRNA downstream 186872 14725976 ~ 14746229 (+) True AMCG00017637
AMCG00017636 mRNA downstream 209577 14748681 ~ 14764827 (+) True AMCG00017636
AMCG00017640 mRNA downstream 285430 14824534 ~ 14825214 (+) True AMCG00017640
AMCG00017641 mRNA downstream 383158 14922262 ~ 14931595 (+) True AMCG00017641
AMCG00017649 mRNA downstream 441460 14980564 ~ 14996066 (+) True AMCG00017649
TU114568 other upstream 479169 14036876 ~ 14039063 (+) False AMCG00017620
TU114078 other upstream 2637733 11879614 ~ 11880499 (+) True G91452
TU113887 other upstream 4934952 9519773 ~ 9583280 (+) True G91281
TU113671 other upstream 5764451 8751713 ~ 8753781 (+) False AMCG00017527
TU113646 other upstream 5828826 8687697 ~ 8689406 (+) False AMCG00017526
TU114814 other downstream 538221 15077325 ~ 15084278 (+) True G92046
TU114828 other downstream 573506 15112610 ~ 15116031 (+) False AMCG00017650
TU114906 other downstream 1327927 15867031 ~ 15867634 (+) True G92123
TU114914 other downstream 1595921 16135025 ~ 16135316 (+) True G92130
TU115097 other downstream 3062431 17601535 ~ 17606208 (+) False AMCG00017668

Expression Profile