RNA id: TU114761



Basic Information


Item Value
RNA id TU114761
length 286
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G92005
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14800091 ~ 14800376 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcatgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgtaggcgctttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatctgagctacagtagctcgtct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114661 lncRNA upstream 260987 14518232 ~ 14539104 (+) True G91931
TU114570 lncRNA upstream 755563 14044084 ~ 14044528 (+) True G91849
TU114438 lncRNA upstream 886334 13858217 ~ 13913757 (+) True G91740
TU114429 lncRNA upstream 969278 13826524 ~ 13830813 (+) False AMCG00017615
TU114422 lncRNA upstream 1266881 13528781 ~ 13533210 (+) True G91727
TU114777 lncRNA downstream 143007 14943383 ~ 15036381 (+) True G92016
TU114805 lncRNA downstream 261921 15062297 ~ 15085398 (+) True G92038
TU114807 lncRNA downstream 265761 15066137 ~ 15067818 (+) True G92039
TU114822 lncRNA downstream 287756 15088132 ~ 15090475 (+) False AMCG00017651
TU114826 lncRNA downstream 292889 15093265 ~ 15106835 (+) True AMCG00017652
AMCG00017636 mRNA upstream 35264 14748681 ~ 14764827 (+) True AMCG00017636
AMCG00017637 mRNA upstream 53862 14725976 ~ 14746229 (+) True AMCG00017637
AMCG00017628 mRNA upstream 326731 14467590 ~ 14473360 (+) True AMCG00017628
AMCG00017621 mRNA upstream 648312 14135600 ~ 14151779 (+) True AMCG00017621
AMCG00017626 mRNA upstream 667628 14129633 ~ 14132463 (+) True AMCG00017626
AMCG00017640 mRNA downstream 24158 14824534 ~ 14825214 (+) True AMCG00017640
AMCG00017641 mRNA downstream 121886 14922262 ~ 14931595 (+) True AMCG00017641
AMCG00017649 mRNA downstream 180188 14980564 ~ 14996066 (+) True AMCG00017649
AMCG00017642 mRNA downstream 221355 15021731 ~ 15033505 (+) True AMCG00017642
AMCG00017644 mRNA downstream 236929 15037305 ~ 15042799 (+) True AMCG00017644
TU114568 other upstream 761028 14036876 ~ 14039063 (+) False AMCG00017620
TU114078 other upstream 2919592 11879614 ~ 11880499 (+) True G91452
TU113887 other upstream 5216811 9519773 ~ 9583280 (+) True G91281
TU113671 other upstream 6046310 8751713 ~ 8753781 (+) False AMCG00017527
TU113646 other upstream 6110685 8687697 ~ 8689406 (+) False AMCG00017526
TU114814 other downstream 276949 15077325 ~ 15084278 (+) True G92046
TU114828 other downstream 312234 15112610 ~ 15116031 (+) False AMCG00017650
TU114906 other downstream 1066655 15867031 ~ 15867634 (+) True G92123
TU114914 other downstream 1334649 16135025 ~ 16135316 (+) True G92130
TU115097 other downstream 2801159 17601535 ~ 17606208 (+) False AMCG00017668

Expression Profile