RNA id: TU114818


Basic Information

Item Value
RNA id TU114818
length 222
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G92049
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15054463 ~ 15054684 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGGATCCCCTGAGCTGTTGACCTCAAGGCCTGTGTGAAGCGCTCCGTGCTGCATGGCGCCAGGTCCCCGATGTCCACGcgtctgtctctcagtctctctggCACAGGAAGAACTCTCCATGTGGGATCATTGCGGATGTGAGCAGTGAGGCTGGAGAACCTGGGGAGATCTCCTGTTAGATCCAGTTGCACTTTCCTGGCTGTCCTCTGTTTAAGGATCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114785 lncRNA downstream 128503 14924393 ~ 14925960 (-) True G92024
TU114762 lncRNA downstream 254062 14800090 ~ 14800401 (-) True G92006
TU114757 lncRNA downstream 289644 14760081 ~ 14764819 (-) False AMCG00017638
TU114571 lncRNA downstream 1009936 14044121 ~ 14044527 (-) True G91850
TU114237 lncRNA downstream 2398130 12656069 ~ 12656333 (-) True G91576
TU114819 lncRNA upstream 608 15055292 ~ 15056623 (-) True G92050
TU114820 lncRNA upstream 2259 15056943 ~ 15057146 (-) True G92051
TU114844 lncRNA upstream 89851 15144535 ~ 15144735 (-) True G92067
TU114846 lncRNA upstream 107634 15162318 ~ 15162712 (-) True G92069
TU114876 lncRNA upstream 430573 15485257 ~ 15485762 (-) True G92093
AMCG00017645 mRNA downstream 1800 15043670 ~ 15052663 (-) True AMCG00017645
AMCG00017646 mRNA downstream 41695 15003446 ~ 15012768 (-) True AMCG00017646
AMCG00017638 mRNA downstream 289631 14760068 ~ 14764832 (-) True AMCG00017638
AMCG00017639 mRNA downstream 378388 14664881 ~ 14676075 (-) True AMCG00017639
AMCG00017632 mRNA downstream 396975 14614561 ~ 14657488 (-) True AMCG00017632
AMCG00017647 mRNA upstream 8743 15063427 ~ 15074519 (-) True AMCG00017647
AMCG00017648 mRNA upstream 21139 15075823 ~ 15080306 (-) True AMCG00017648
AMCG00017660 mRNA upstream 158813 15213497 ~ 15213745 (-) True AMCG00017660
AMCG00017659 mRNA upstream 168818 15223502 ~ 15234769 (-) True AMCG00017659
AMCG00017661 mRNA upstream 1730984 16785668 ~ 16797841 (-) True AMCG00017661
TU114641 other downstream 574676 14433158 ~ 14479787 (-) True AMCG00017631
TU113928 other downstream 4557359 10361300 ~ 10497104 (-) True AMCG00017556
TU113686 other downstream 6298556 8755288 ~ 8755907 (-) True G91119
TU113572 other downstream 6539508 8496495 ~ 8514955 (-) True AMCG00017520
TU113456 other downstream 7057868 7992137 ~ 7996595 (-) True G90939
TU114907 other upstream 812263 15866947 ~ 15867647 (-) True G92124
TU114913 other upstream 975718 16030402 ~ 16030905 (-) True G92129
TU114912 other upstream 975772 16030456 ~ 16030905 (-) False G92129
TU115048 other upstream 2413921 17468605 ~ 17474339 (-) False AMCG00017665
TU115289 other upstream 3408100 18462784 ~ 18463176 (-) True G92436

Expression Profile