RNA id: TU114916


Basic Information

Item Value
RNA id TU114916
length 328
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G92132
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 16135380 ~ 16135707 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tgttgaagaacctttggcaccaattacagcctcaagtctttttgagtatgatgctacaagcttggcacacctatttttgggcagtttctcccattcttctttgcaggacctctcaagctccatcaggttggatgtggagtgtcggtgcacagccattttcagatctctccagagatgttcaatcgggttcaagtctgggctctggctgggccactcaaggacattcacagagttgtcctgtagccactcctttgttatcttggctgtgtgcttagggtggttgtcctgttggaagatgaatcttcgccccagtctgaggtccagagca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114876 lncRNA downstream 649618 15485257 ~ 15485762 (-) True G92093
TU114846 lncRNA downstream 972668 15162318 ~ 15162712 (-) True G92069
TU114844 lncRNA downstream 990645 15144535 ~ 15144735 (-) True G92067
TU114820 lncRNA downstream 1078234 15056943 ~ 15057146 (-) True G92051
TU114819 lncRNA downstream 1078757 15055292 ~ 15056623 (-) True G92050
TU114920 lncRNA upstream 30932 16166639 ~ 16182063 (-) True G92134
TU114921 lncRNA upstream 46422 16182129 ~ 16182328 (-) True G92135
TU114934 lncRNA upstream 179338 16315045 ~ 16315522 (-) True G92146
TU114936 lncRNA upstream 294749 16430456 ~ 16430711 (-) True G92148
TU114944 lncRNA upstream 620723 16756430 ~ 16756667 (-) True G92156
AMCG00017659 mRNA downstream 900611 15223502 ~ 15234769 (-) True AMCG00017659
AMCG00017660 mRNA downstream 921635 15213497 ~ 15213745 (-) True AMCG00017660
AMCG00017648 mRNA downstream 1055074 15075823 ~ 15080306 (-) True AMCG00017648
AMCG00017647 mRNA downstream 1060861 15063427 ~ 15074519 (-) True AMCG00017647
AMCG00017645 mRNA downstream 1082717 15043670 ~ 15052663 (-) True AMCG00017645
AMCG00017661 mRNA upstream 649961 16785668 ~ 16797841 (-) True AMCG00017661
AMCG00017663 mRNA upstream 1251777 17387484 ~ 17394619 (-) True AMCG00017663
AMCG00017664 mRNA upstream 1289704 17425411 ~ 17462601 (-) True AMCG00017664
AMCG00017665 mRNA upstream 1332899 17468606 ~ 17487497 (-) True AMCG00017665
AMCG00017670 mRNA upstream 1379176 17514883 ~ 17531328 (-) True AMCG00017670
TU114913 other downstream 104475 16030402 ~ 16030905 (-) True G92129
TU114912 other downstream 104475 16030456 ~ 16030905 (-) False G92129
TU114907 other downstream 267733 15866947 ~ 15867647 (-) True G92124
TU114641 other downstream 1655593 14433158 ~ 14479787 (-) True AMCG00017631
TU113928 other downstream 5638276 10361300 ~ 10497104 (-) True AMCG00017556
TU115048 other upstream 1332898 17468605 ~ 17474339 (-) False AMCG00017665
TU115289 other upstream 2327077 18462784 ~ 18463176 (-) True G92436
TU115494 other upstream 3277280 19412987 ~ 19419356 (-) False G92591
TU115492 other upstream 3282494 19418201 ~ 19419356 (-) True G92591
TU116215 other upstream 7182419 23318126 ~ 23321954 (-) True AMCG00017780

Expression Profile