RNA id: TU114944



Basic Information


Item Value
RNA id TU114944
length 238
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G92156
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 16756430 ~ 16756667 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tatatatatatatatatatatatatatatatatatatacactcacctaaaggattattaggaacacatgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagtgtggcatggttgttggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114936 lncRNA downstream 325719 16430456 ~ 16430711 (-) True G92148
TU114934 lncRNA downstream 440908 16315045 ~ 16315522 (-) True G92146
TU114921 lncRNA downstream 574102 16182129 ~ 16182328 (-) True G92135
TU114920 lncRNA downstream 574367 16166639 ~ 16182063 (-) True G92134
TU114916 lncRNA downstream 620723 16135380 ~ 16135707 (-) True G92132
TU114968 lncRNA upstream 169827 16926494 ~ 16926810 (-) True G92176
TU114971 lncRNA upstream 240553 16997220 ~ 16997504 (-) True G92179
TU114975 lncRNA upstream 404578 17161245 ~ 17161645 (-) True G92183
TU114993 lncRNA upstream 495763 17252430 ~ 17252630 (-) True G92200
TU115016 lncRNA upstream 631960 17388627 ~ 17394721 (-) False AMCG00017663
AMCG00017659 mRNA downstream 1521661 15223502 ~ 15234769 (-) True AMCG00017659
AMCG00017660 mRNA downstream 1542685 15213497 ~ 15213745 (-) True AMCG00017660
AMCG00017648 mRNA downstream 1676124 15075823 ~ 15080306 (-) True AMCG00017648
AMCG00017647 mRNA downstream 1681911 15063427 ~ 15074519 (-) True AMCG00017647
AMCG00017645 mRNA downstream 1703767 15043670 ~ 15052663 (-) True AMCG00017645
AMCG00017661 mRNA upstream 29001 16785668 ~ 16797841 (-) True AMCG00017661
AMCG00017663 mRNA upstream 630817 17387484 ~ 17394619 (-) True AMCG00017663
AMCG00017664 mRNA upstream 668744 17425411 ~ 17462601 (-) True AMCG00017664
AMCG00017665 mRNA upstream 711939 17468606 ~ 17487497 (-) True AMCG00017665
AMCG00017670 mRNA upstream 758216 17514883 ~ 17531328 (-) True AMCG00017670
TU114913 other downstream 725525 16030402 ~ 16030905 (-) True G92129
TU114912 other downstream 725525 16030456 ~ 16030905 (-) False G92129
TU114907 other downstream 888783 15866947 ~ 15867647 (-) True G92124
TU114641 other downstream 2276643 14433158 ~ 14479787 (-) True AMCG00017631
TU113928 other downstream 6259326 10361300 ~ 10497104 (-) True AMCG00017556
TU115048 other upstream 711938 17468605 ~ 17474339 (-) False AMCG00017665
TU115289 other upstream 1706117 18462784 ~ 18463176 (-) True G92436
TU115494 other upstream 2656320 19412987 ~ 19419356 (-) False G92591
TU115492 other upstream 2661534 19418201 ~ 19419356 (-) True G92591
TU116215 other upstream 6561459 23318126 ~ 23321954 (-) True AMCG00017780

Expression Profile