Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU114974 |
| length | 401 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G92182 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 17161245 ~ 17161645 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008213 | protein alkylation | biological_process |
| GO:0043414 | macromolecule methylation | biological_process |
| GO:0006479 | protein methylation | biological_process |
| GO:0016569 | covalent chromatin modification | biological_process |
| GO:0016570 | histone modification | biological_process |
| GO:0016571 | histone methylation | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU114970 | lncRNA | upstream | 163786 | 16997218 ~ 16997459 (+) | True | G92178 |
| TU114959 | lncRNA | upstream | 251331 | 16841453 ~ 16909914 (+) | True | G92169 |
| TU114940 | lncRNA | upstream | 497010 | 16663866 ~ 16664235 (+) | True | G92152 |
| TU114939 | lncRNA | upstream | 557326 | 16603651 ~ 16603919 (+) | True | G92151 |
| TU114935 | lncRNA | upstream | 730533 | 16430452 ~ 16430712 (+) | True | G92147 |
| TU114990 | lncRNA | downstream | 80171 | 17241816 ~ 17242064 (+) | True | G92197 |
| TU115031 | lncRNA | downstream | 278015 | 17439660 ~ 17440209 (+) | True | G92228 |
| TU115032 | lncRNA | downstream | 279013 | 17440658 ~ 17440964 (+) | True | G92229 |
| TU115033 | lncRNA | downstream | 283980 | 17445625 ~ 17445993 (+) | True | G92230 |
| TU115073 | lncRNA | downstream | 404998 | 17566643 ~ 17568163 (+) | True | G92267 |
| AMCG00017656 | mRNA | upstream | 1326195 | 15828929 ~ 15835050 (+) | True | AMCG00017656 |
| AMCG00017658 | mRNA | upstream | 1366798 | 15609983 ~ 15794447 (+) | True | AMCG00017658 |
| AMCG00017657 | mRNA | upstream | 1556135 | 15599419 ~ 15605110 (+) | True | AMCG00017657 |
| AMCG00017654 | mRNA | upstream | 1948986 | 15207609 ~ 15212259 (+) | True | AMCG00017654 |
| AMCG00017655 | mRNA | upstream | 1967081 | 15193702 ~ 15194164 (+) | True | AMCG00017655 |
| AMCG00017662 | mRNA | downstream | 234086 | 17395731 ~ 17428335 (+) | True | AMCG00017662 |
| AMCG00017666 | mRNA | downstream | 347606 | 17509251 ~ 17511291 (+) | True | AMCG00017666 |
| AMCG00017667 | mRNA | downstream | 416410 | 17578055 ~ 17585825 (+) | True | AMCG00017667 |
| AMCG00017668 | mRNA | downstream | 440147 | 17601792 ~ 17620033 (+) | True | AMCG00017668 |
| AMCG00017673 | mRNA | downstream | 514964 | 17676609 ~ 17692389 (+) | True | AMCG00017673 |
| TU114914 | other | upstream | 1025929 | 16135025 ~ 16135316 (+) | True | G92130 |
| TU114906 | other | upstream | 1293611 | 15867031 ~ 15867634 (+) | True | G92123 |
| TU114828 | other | upstream | 2045214 | 15112610 ~ 15116031 (+) | False | AMCG00017650 |
| TU114814 | other | upstream | 2076967 | 15077325 ~ 15084278 (+) | True | G92046 |
| TU114568 | other | upstream | 3122182 | 14036876 ~ 14039063 (+) | False | AMCG00017620 |
| TU115097 | other | downstream | 439890 | 17601535 ~ 17606208 (+) | False | AMCG00017668 |
| TU115411 | other | downstream | 1911593 | 19073238 ~ 19073662 (+) | True | G92538 |
| TU115469 | other | downstream | 2240441 | 19402086 ~ 19411990 (+) | False | AMCG00017710 |
| TU115496 | other | downstream | 2259665 | 19421310 ~ 19423679 (+) | False | AMCG00017710 |
| TU115510 | other | downstream | 2282527 | 19444172 ~ 19528293 (+) | True | AMCG00017712 |
