RNA id: TU115294



Basic Information


Item Value
RNA id TU115294
length 320
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G92441
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 18483473 ~ 18483792 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TACCAATTAAACTCCAGGGAAACAAGAGTTCCTAACTTTAAGAGTGGTCTGGCTTTCTTCTGCACAGAAATATACGCTTACAGAAGATGTACTGAAACTCCACAAAGGGTGGAGTGACGGATGATGAACGCGTGTTCTCAAGCTACAGGAAGCAGTGTAACAGTACTTGACTATCTTGCCGGCGGTGGGCTGCTCCTGTCCCCAGTAGTAGAGATCGAGGCCGAACGGCAGCACAGGTGCATTCTGCTTCTCATCCGGCAGGTTCCCTCCATCGCTGCGGGGCTCCGGTGCGCCGGCTGCTGACTCGGAGCTTTCAGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU115293 lncRNA downstream 1399 18481771 ~ 18482074 (-) True G92440
TU115288 lncRNA downstream 21771 18461368 ~ 18461702 (-) True G92435
TU115287 lncRNA downstream 23657 18459569 ~ 18459816 (-) True G92434
TU115281 lncRNA downstream 30661 18387805 ~ 18452812 (-) True G92428
TU115247 lncRNA downstream 378205 18104989 ~ 18105268 (-) True G92401
TU115295 lncRNA upstream 1475 18485267 ~ 18486004 (-) True G92442
TU115296 lncRNA upstream 5759 18489551 ~ 18490093 (-) True G92443
TU115297 lncRNA upstream 8746 18492538 ~ 18493230 (-) True G92444
TU115324 lncRNA upstream 279305 18763097 ~ 18763661 (-) True G92464
TU115365 lncRNA upstream 366270 18850062 ~ 18850628 (-) True G92499
AMCG00017687 mRNA downstream 214725 18232408 ~ 18268748 (-) True AMCG00017687
AMCG00017686 mRNA downstream 294120 18181565 ~ 18189353 (-) True AMCG00017686
AMCG00017688 mRNA downstream 306462 18174151 ~ 18177011 (-) True AMCG00017688
AMCG00017684 mRNA downstream 541308 17928433 ~ 17942165 (-) True AMCG00017684
AMCG00017680 mRNA downstream 649656 17825058 ~ 17833817 (-) True AMCG00017680
AMCG00017694 mRNA upstream 14337 18498129 ~ 18501874 (-) True AMCG00017694
AMCG00017695 mRNA upstream 243907 18727699 ~ 18737258 (-) True AMCG00017695
AMCG00017699 mRNA upstream 298938 18782730 ~ 18790340 (-) True AMCG00017699
AMCG00017698 mRNA upstream 317207 18800999 ~ 18807177 (-) True AMCG00017698
AMCG00017697 mRNA upstream 339608 18823400 ~ 18828559 (-) True AMCG00017697
TU115289 other downstream 20297 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 1009134 17468605 ~ 17474339 (-) False AMCG00017665
TU114913 other downstream 2452568 16030402 ~ 16030905 (-) True G92129
TU114912 other downstream 2452568 16030456 ~ 16030905 (-) False G92129
TU114907 other downstream 2615826 15866947 ~ 15867647 (-) True G92124
TU115494 other upstream 929195 19412987 ~ 19419356 (-) False G92591
TU115492 other upstream 934409 19418201 ~ 19419356 (-) True G92591
TU116215 other upstream 4834334 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 4834334 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 4834334 23318126 ~ 23321954 (-) False AMCG00017780

Expression Profile