RNA id: TU115365


Basic Information

Item Value
RNA id TU115365
length 567
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G92499
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 18850062 ~ 18850628 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggggggggaggggagtttATTAGAGTTTATAAGGGAGGACAAGGTAACAAACAATCCCAGCATAATTATGGCCAACAAAGCTCTCCTTCCTAGCCTATAATCAGTTTACACACCAGTACTAATgccatttgtaataaaaaataagtgatcCACTGTGCTGAGTAAATAGTGAACAGCACATAAACAGGAAGATGCCAAGAGGCTCAAAGAGAAGATAAGGCAAACTAAAAAAAGATACAATCAAAGCAAACATAATTTAGCAGCTTCCTGGGAGATCAACAGAGATAGATAGTGTACACAGAGGAAACTTTTACAAAACTTGTGTCGGTACATGAAAACATGATTCTGTGTCTTTAGTACAGATAGAGGCTGTTTTTCAGAGTGGTAGGTCTGGGGATTTAGGACAGCACTGGAGGTTTTCTTCAGATGCTTCTTCTGTGCTCCCAGTGACCAGGCTCAGTGAAAAGCGGAAGTAGCAACACGTCCCGCCTGCTTGCTTCCTCAGCTCCATTTGGTTTTGTGGAGAACAGCTGGGCGGAGATGCTGCAGATGTCCAAAGCCAAAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115324 lncRNA downstream 86401 18763097 ~ 18763661 (-) True G92464
TU115297 lncRNA downstream 356832 18492538 ~ 18493230 (-) True G92444
TU115296 lncRNA downstream 359969 18489551 ~ 18490093 (-) True G92443
TU115295 lncRNA downstream 364058 18485267 ~ 18486004 (-) True G92442
TU115294 lncRNA downstream 366270 18483473 ~ 18483792 (-) True G92441
TU115412 lncRNA upstream 222610 19073238 ~ 19073865 (-) True G92539
TU115414 lncRNA upstream 275432 19126060 ~ 19126349 (-) True G92541
TU115513 lncRNA upstream 762077 19612705 ~ 19613182 (-) True G92608
TU115514 lncRNA upstream 762613 19613241 ~ 19617787 (-) True G92609
TU115574 lncRNA upstream 1015344 19865972 ~ 19866417 (-) True G92657
AMCG00017696 mRNA downstream 821 18843890 ~ 18849241 (-) True AMCG00017696
AMCG00017697 mRNA downstream 21503 18823400 ~ 18828559 (-) True AMCG00017697
AMCG00017698 mRNA downstream 42885 18800999 ~ 18807177 (-) True AMCG00017698
AMCG00017699 mRNA downstream 59722 18782730 ~ 18790340 (-) True AMCG00017699
AMCG00017695 mRNA downstream 112804 18727699 ~ 18737258 (-) True AMCG00017695
AMCG00017703 mRNA upstream 15128 18865756 ~ 18878190 (-) True AMCG00017703
AMCG00017704 mRNA upstream 27594 18878222 ~ 18889526 (-) True AMCG00017704
AMCG00017702 mRNA upstream 39593 18890221 ~ 18896507 (-) True AMCG00017702
AMCG00017700 mRNA upstream 56635 18907263 ~ 18911871 (-) True AMCG00017700
AMCG00017701 mRNA upstream 62537 18913165 ~ 18924436 (-) True AMCG00017701
TU115289 other downstream 386886 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 1375723 17468605 ~ 17474339 (-) False AMCG00017665
TU114913 other downstream 2819157 16030402 ~ 16030905 (-) True G92129
TU114912 other downstream 2819157 16030456 ~ 16030905 (-) False G92129
TU114907 other downstream 2982415 15866947 ~ 15867647 (-) True G92124
TU115494 other upstream 562359 19412987 ~ 19419356 (-) False G92591
TU115492 other upstream 567573 19418201 ~ 19419356 (-) True G92591
TU116215 other upstream 4467498 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 4467498 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 4467498 23318126 ~ 23321954 (-) False AMCG00017780

Expression Profile