RNA id: TU115414


Basic Information

Item Value
RNA id TU115414
length 290
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G92541
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 19126060 ~ 19126349 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gcctaatattgtgtaggtcccccttttgccgccaaaacagccctgacccgtcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgcttgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcttccattgctccgtgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115412 lncRNA downstream 52195 19073238 ~ 19073865 (-) True G92539
TU115365 lncRNA downstream 275432 18850062 ~ 18850628 (-) True G92499
TU115324 lncRNA downstream 362399 18763097 ~ 18763661 (-) True G92464
TU115297 lncRNA downstream 632830 18492538 ~ 18493230 (-) True G92444
TU115296 lncRNA downstream 635967 18489551 ~ 18490093 (-) True G92443
TU115513 lncRNA upstream 486356 19612705 ~ 19613182 (-) True G92608
TU115514 lncRNA upstream 486892 19613241 ~ 19617787 (-) True G92609
TU115574 lncRNA upstream 739623 19865972 ~ 19866417 (-) True G92657
TU115579 lncRNA upstream 741069 19867418 ~ 19867636 (-) True G92660
TU115611 lncRNA upstream 779643 19905992 ~ 19920152 (-) True G92682
AMCG00017701 mRNA downstream 201624 18913165 ~ 18924436 (-) True AMCG00017701
AMCG00017700 mRNA downstream 214189 18907263 ~ 18911871 (-) True AMCG00017700
AMCG00017702 mRNA downstream 229553 18890221 ~ 18896507 (-) True AMCG00017702
AMCG00017704 mRNA downstream 236534 18878222 ~ 18889526 (-) True AMCG00017704
AMCG00017703 mRNA downstream 247870 18865756 ~ 18878190 (-) True AMCG00017703
AMCG00017707 mRNA upstream 69772 19196121 ~ 19202825 (-) True AMCG00017707
AMCG00017709 mRNA upstream 241365 19367714 ~ 19384083 (-) True AMCG00017709
AMCG00017711 mRNA upstream 299690 19426039 ~ 19433689 (-) True AMCG00017711
AMCG00017715 mRNA upstream 525167 19651516 ~ 19654680 (-) True AMCG00017715
AMCG00017716 mRNA upstream 530584 19656933 ~ 19659528 (-) True AMCG00017716
TU115289 other downstream 662884 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 1651721 17468605 ~ 17474339 (-) False AMCG00017665
TU114913 other downstream 3095155 16030402 ~ 16030905 (-) True G92129
TU114912 other downstream 3095155 16030456 ~ 16030905 (-) False G92129
TU114907 other downstream 3258413 15866947 ~ 15867647 (-) True G92124
TU115494 other upstream 286638 19412987 ~ 19419356 (-) False G92591
TU115492 other upstream 291852 19418201 ~ 19419356 (-) True G92591
TU116215 other upstream 4191777 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 4191777 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 4191777 23318126 ~ 23321954 (-) False AMCG00017780

Expression Profile