RNA id: TU115749


Basic Information

Item Value
RNA id TU115749
length 278
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G92798
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20624143 ~ 20624420 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TAGAGAAAACAGTCTCTCAAGAACCCGATCGCTGACATAAATCATGTTGTCCGACGCTTGATCTGAATTTAGGATCGCCACCAAAGCacccgcagcagcagcagccccgaCATCTATCTTGGTCGCGGTCTTGTAGAGCCGATTTCCgcagatatgcgcagatctgcagaatcccgcgaccccattggtggagcagcgcagatctgctcAGATTGTGCGCTACGCGAACGCCACCCTTGAAACAAAGCAACAGTAACAGCGCAAACAGGGAAACGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115649 lncRNA downstream 208531 20415306 ~ 20415612 (-) True G92714
TU115645 lncRNA downstream 265518 20302000 ~ 20358625 (-) False AMCG00017725
TU115646 lncRNA downstream 306712 20302000 ~ 20317431 (-) True AMCG00017725
TU115611 lncRNA downstream 703991 19905992 ~ 19920152 (-) True G92682
TU115579 lncRNA downstream 756507 19867418 ~ 19867636 (-) True G92660
TU115751 lncRNA upstream 10252 20634672 ~ 20634880 (-) True G92800
TU115776 lncRNA upstream 47645 20672065 ~ 20676278 (-) True G92822
TU115778 lncRNA upstream 52239 20676659 ~ 20734422 (-) True G92823
TU115794 lncRNA upstream 193255 20817675 ~ 20822960 (-) True G92836
TU115796 lncRNA upstream 196046 20820466 ~ 20821995 (-) True G92838
AMCG00017741 mRNA downstream 2038 20620406 ~ 20622105 (-) True AMCG00017741
AMCG00017733 mRNA downstream 7914 20603355 ~ 20616229 (-) True AMCG00017733
AMCG00017739 mRNA downstream 22742 20595312 ~ 20601401 (-) True AMCG00017739
AMCG00017735 mRNA downstream 39182 20571457 ~ 20584961 (-) True AMCG00017735
AMCG00017738 mRNA downstream 52733 20553667 ~ 20571410 (-) True AMCG00017738
AMCG00017737 mRNA upstream 1664 20626084 ~ 20627983 (-) True AMCG00017737
AMCG00017749 mRNA upstream 28725 20653145 ~ 20667672 (-) True AMCG00017749
AMCG00017748 mRNA upstream 65801 20690221 ~ 20741395 (-) True AMCG00017748
AMCG00017751 mRNA upstream 123735 20748155 ~ 20774424 (-) True AMCG00017751
AMCG00017752 mRNA upstream 257073 20881493 ~ 20913956 (-) True AMCG00017752
TU115494 other downstream 1204787 19412987 ~ 19419356 (-) False G92591
TU115492 other downstream 1204787 19418201 ~ 19419356 (-) True G92591
TU115289 other downstream 2160967 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 3149804 17468605 ~ 17474339 (-) False AMCG00017665
TU114912 other downstream 4593238 16030456 ~ 16030905 (-) False G92129
TU116215 other upstream 2693706 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 2693706 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 2693706 23318126 ~ 23321954 (-) False AMCG00017780
TU116981 other upstream 5388241 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 5388241 26012661 ~ 26015492 (-) False AMCG00017866

Expression Profile