RNA id: TU115953



Basic Information


Item Value
RNA id TU115953
length 207
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G92953
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22152372 ~ 22152578 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgcacttgtccacattgaatttcatctgccaggtgtcggcccacaactgaatattatttaagtccctttgaataacctgtgctgccaaggttgtatctgctgagccacctattttagtatcatctgcagatttgacaagtttgctaactatcccagagtccagatcattaatatagattagaaaaagcaaaggccctaatactgatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU115945 lncRNA downstream 27630 22044980 ~ 22124742 (-) True G92947
TU115948 lncRNA downstream 58967 22092965 ~ 22093405 (-) True G92948
TU115940 lncRNA downstream 178083 21973984 ~ 21974289 (-) True G92943
TU115857 lncRNA downstream 1023373 21128471 ~ 21128999 (-) True G92892
TU115794 lncRNA downstream 1329412 20817675 ~ 20822960 (-) True G92836
TU115955 lncRNA upstream 67943 22220521 ~ 22220780 (-) True G92955
TU115974 lncRNA upstream 120403 22272981 ~ 22274977 (-) True G92972
TU116050 lncRNA upstream 533846 22686424 ~ 22689677 (-) True G93024
TU116052 lncRNA upstream 538097 22690675 ~ 22691532 (-) True G93026
TU116057 lncRNA upstream 625226 22777804 ~ 22778099 (-) True G93028
AMCG00017757 mRNA downstream 749112 21399301 ~ 21403260 (-) True AMCG00017757
AMCG00017758 mRNA downstream 782883 21316467 ~ 21369489 (-) True AMCG00017758
AMCG00017759 mRNA downstream 848249 21296047 ~ 21304123 (-) True AMCG00017759
AMCG00017753 mRNA downstream 1015812 21129357 ~ 21136560 (-) True AMCG00017753
AMCG00017752 mRNA downstream 1238416 20881493 ~ 20913956 (-) True AMCG00017752
AMCG00017763 mRNA upstream 156671 22309249 ~ 22366047 (-) True AMCG00017763
AMCG00017776 mRNA upstream 1016995 23169573 ~ 23194544 (-) True AMCG00017776
AMCG00017777 mRNA upstream 1111456 23264034 ~ 23279042 (-) True AMCG00017777
AMCG00017782 mRNA upstream 1144110 23296688 ~ 23313459 (-) True AMCG00017782
AMCG00017780 mRNA upstream 1165515 23318093 ~ 23321930 (-) False AMCG00017780
TU115494 other downstream 2733016 19412987 ~ 19419356 (-) False G92591
TU115492 other downstream 2733016 19418201 ~ 19419356 (-) True G92591
TU115289 other downstream 3689196 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 4678033 17468605 ~ 17474339 (-) False AMCG00017665
TU114912 other downstream 6121467 16030456 ~ 16030905 (-) False G92129
TU116215 other upstream 1165548 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 1165548 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 1165548 23318126 ~ 23321954 (-) False AMCG00017780
TU116981 other upstream 3860083 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 3860083 26012661 ~ 26015492 (-) False AMCG00017866

Expression Profile