RNA id: TU115955


Basic Information

Item Value
RNA id TU115955
length 260
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G92955
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22220521 ~ 22220780 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gttcaatctttgtttctcatggtctgagagtccttcaggtgccttttggcaaactccaggtgggctgtcatgtgccttttactgaggagtggcttccgtctggccactctaccatacaggcctgattggtggagtgctgcagagatggttgttcttctggaaggttctcctctctccacagagacacgctggagctctgtcagagtgaccatcgggttcttggtcacctccctgactaaggcccttctcccccgatcgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115953 lncRNA downstream 67943 22152372 ~ 22152578 (-) True G92953
TU115945 lncRNA downstream 95779 22044980 ~ 22124742 (-) True G92947
TU115948 lncRNA downstream 127116 22092965 ~ 22093405 (-) True G92948
TU115940 lncRNA downstream 246232 21973984 ~ 21974289 (-) True G92943
TU115857 lncRNA downstream 1091522 21128471 ~ 21128999 (-) True G92892
TU115974 lncRNA upstream 52201 22272981 ~ 22274977 (-) True G92972
TU116050 lncRNA upstream 465644 22686424 ~ 22689677 (-) True G93024
TU116052 lncRNA upstream 469895 22690675 ~ 22691532 (-) True G93026
TU116057 lncRNA upstream 557024 22777804 ~ 22778099 (-) True G93028
TU116062 lncRNA upstream 580591 22801371 ~ 22804384 (-) True G93033
AMCG00017757 mRNA downstream 817261 21399301 ~ 21403260 (-) True AMCG00017757
AMCG00017758 mRNA downstream 851032 21316467 ~ 21369489 (-) True AMCG00017758
AMCG00017759 mRNA downstream 916398 21296047 ~ 21304123 (-) True AMCG00017759
AMCG00017753 mRNA downstream 1083961 21129357 ~ 21136560 (-) True AMCG00017753
AMCG00017752 mRNA downstream 1306565 20881493 ~ 20913956 (-) True AMCG00017752
AMCG00017763 mRNA upstream 88469 22309249 ~ 22366047 (-) True AMCG00017763
AMCG00017776 mRNA upstream 948793 23169573 ~ 23194544 (-) True AMCG00017776
AMCG00017777 mRNA upstream 1043254 23264034 ~ 23279042 (-) True AMCG00017777
AMCG00017782 mRNA upstream 1075908 23296688 ~ 23313459 (-) True AMCG00017782
AMCG00017780 mRNA upstream 1097313 23318093 ~ 23321930 (-) False AMCG00017780
TU115494 other downstream 2801165 19412987 ~ 19419356 (-) False G92591
TU115492 other downstream 2801165 19418201 ~ 19419356 (-) True G92591
TU115289 other downstream 3757345 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 4746182 17468605 ~ 17474339 (-) False AMCG00017665
TU114912 other downstream 6189616 16030456 ~ 16030905 (-) False G92129
TU116215 other upstream 1097346 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 1097346 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 1097346 23318126 ~ 23321954 (-) False AMCG00017780
TU116981 other upstream 3791881 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 3791881 26012661 ~ 26015492 (-) False AMCG00017866

Expression Profile