RNA id: TU116067


Basic Information

Item Value
RNA id TU116067
length 284
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G93038
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22839151 ~ 22839434 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gggaaataagtatttgatcccctatcaatcagctagatttctggctcccaggtgtcttttatacaggtaacgagctgagattaggagcactctcttaaagggagtgctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgagCTACAAGACCATCCCCAAGCAGCTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU116062 lncRNA downstream 34767 22801371 ~ 22804384 (-) True G93033
TU116057 lncRNA downstream 61052 22777804 ~ 22778099 (-) True G93028
TU116052 lncRNA downstream 147619 22690675 ~ 22691532 (-) True G93026
TU116050 lncRNA downstream 149474 22686424 ~ 22689677 (-) True G93024
TU115974 lncRNA downstream 564174 22272981 ~ 22274977 (-) True G92972
TU116128 lncRNA upstream 450898 23290332 ~ 23290681 (-) True G93090
TU116130 lncRNA upstream 455385 23294819 ~ 23295369 (-) True G93092
TU116205 lncRNA upstream 456366 23295800 ~ 23296246 (-) True G93159
TU116222 lncRNA upstream 487091 23326525 ~ 23329744 (-) True G93165
TU116235 lncRNA upstream 604777 23444211 ~ 23540120 (-) True G93173
AMCG00017763 mRNA downstream 473104 22309249 ~ 22366047 (-) True AMCG00017763
AMCG00017757 mRNA downstream 1435891 21399301 ~ 21403260 (-) True AMCG00017757
AMCG00017758 mRNA downstream 1469662 21316467 ~ 21369489 (-) True AMCG00017758
AMCG00017759 mRNA downstream 1535028 21296047 ~ 21304123 (-) True AMCG00017759
AMCG00017753 mRNA downstream 1702591 21129357 ~ 21136560 (-) True AMCG00017753
AMCG00017776 mRNA upstream 330139 23169573 ~ 23194544 (-) True AMCG00017776
AMCG00017777 mRNA upstream 424600 23264034 ~ 23279042 (-) True AMCG00017777
AMCG00017782 mRNA upstream 457254 23296688 ~ 23313459 (-) True AMCG00017782
AMCG00017780 mRNA upstream 478659 23318093 ~ 23321930 (-) False AMCG00017780
AMCG00017781 mRNA upstream 491510 23330944 ~ 23345917 (-) True AMCG00017781
TU115494 other downstream 3419795 19412987 ~ 19419356 (-) False G92591
TU115492 other downstream 3419795 19418201 ~ 19419356 (-) True G92591
TU115289 other downstream 4375975 18462784 ~ 18463176 (-) True G92436
TU115048 other downstream 5364812 17468605 ~ 17474339 (-) False AMCG00017665
TU114912 other downstream 6808246 16030456 ~ 16030905 (-) False G92129
TU116215 other upstream 478692 23318126 ~ 23321954 (-) True AMCG00017780
TU116216 other upstream 478692 23318126 ~ 23321954 (-) False AMCG00017780
TU116217 other upstream 478692 23318126 ~ 23321954 (-) False AMCG00017780
TU116981 other upstream 3173227 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other upstream 3173227 26012661 ~ 26015492 (-) False AMCG00017866

Expression Profile