RNA id: TU117088


Basic Information

Item Value
RNA id TU117088
length 264
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G93843
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 26498914 ~ 26499177 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctgtgctttttctaatctatattaatgatctggactctgggatagttagcaaacttgtcaaaattgcagatgatactaaaataggtggctcagcagatacaatcttggcagcacaggctattcaaagggacttagataatattcagttgtgggccgacacctggcagatgaaattcaatgtggacaagtgcaaggtattacatgcaggta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU117058 lncRNA downstream 145190 26353517 ~ 26353724 (-) True G93816
TU117044 lncRNA downstream 240547 26258096 ~ 26258367 (-) True G93802
TU116973 lncRNA downstream 550320 25947235 ~ 25948594 (-) False AMCG00017861
TU116972 lncRNA downstream 551960 25945141 ~ 25946954 (-) False AMCG00017861
TU116944 lncRNA downstream 689061 25809544 ~ 25809853 (-) True G93718
TU117271 lncRNA upstream 1263509 27762686 ~ 27767331 (-) True G94008
TU117276 lncRNA upstream 1279860 27779037 ~ 27784050 (-) True G94012
TU117305 lncRNA upstream 1339074 27838251 ~ 27839790 (-) False AMCG00017902
TU117306 lncRNA upstream 1339074 27838251 ~ 27839790 (-) False AMCG00017902
TU117307 lncRNA upstream 1339074 27838251 ~ 27839790 (-) True AMCG00017902
AMCG00017875 mRNA downstream 31046 26458218 ~ 26467868 (-) True AMCG00017875
AMCG00017874 mRNA downstream 46571 26444418 ~ 26452343 (-) True AMCG00017874
AMCG00017877 mRNA downstream 59803 26437761 ~ 26439111 (-) True AMCG00017877
AMCG00017876 mRNA downstream 90921 26283965 ~ 26407993 (-) True AMCG00017876
AMCG00017872 mRNA downstream 305081 26112113 ~ 26193833 (-) True AMCG00017872
AMCG00017878 mRNA upstream 143205 26642382 ~ 26650068 (-) True AMCG00017878
AMCG00017879 mRNA upstream 178080 26677257 ~ 26708132 (-) True AMCG00017879
AMCG00017880 mRNA upstream 295624 26794801 ~ 26820001 (-) True AMCG00017880
AMCG00017885 mRNA upstream 423617 26922794 ~ 26930593 (-) True AMCG00017885
AMCG00017884 mRNA upstream 478883 26978060 ~ 26985839 (-) True AMCG00017884
TU117034 other downstream 388840 26109060 ~ 26110074 (-) True G93796
TU117033 other downstream 391109 26104026 ~ 26107805 (-) True G93795
TU116981 other downstream 483422 26012661 ~ 26015492 (-) False AMCG00017866
TU116982 other downstream 483422 26012661 ~ 26015492 (-) False AMCG00017866
TU116217 other downstream 3176960 23318126 ~ 23321954 (-) False AMCG00017780
TU117337 other upstream 1604122 28103299 ~ 28144589 (-) True AMCG00017906
TU117465 other upstream 2374984 28874161 ~ 28875923 (-) True G94172
TU117547 other upstream 2770058 29269235 ~ 29273168 (-) True G94238
TU117930 other upstream 4128811 30627988 ~ 30658493 (-) True G94543
TU118224 other upstream 5763599 32262776 ~ 32263531 (-) False AMCG00018000

Expression Profile